Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3341 ATGGAAGCTATTGCTACAGTGATGATCATGCTAATCATAAGTACTGTGTCCTTCACTTCTCTAGCGAGTGGACTAAGTTCGAATTACTATGACCACACGTGCCCTCATGTAGACTCCATCGTCTCCAGTGCTGTACATAAAGCAACCACCAATGACAAAACTGTCCCTGCTGCTCTGCTTCGCATGCATTTTCATGATTGCTTCATAAGGGGTTGTGATGCCTCTGTTCTGCTGGAATCAAAGGGAAAGAACAAAGCAGAAAAAGATGGGCCTCCTAACATTTCTTTGCATGCATTCTATGTCATTGACAATGCTAAGAAAGCAGTAGAAGCTGTTTGCCCTGGTGTTGTATCTTGTGCTGATATTGTGGCTCTTGCTGCTAGGGACGCTGTTACACTGTCTGGAGGGCCCACTTGGGAAGTACCAAAAGGAAGAAAGGATGGTAGAATATCAAAGGCCACTGAAACCAGACAATTGCCAGCTCCTACTTTCAACATCTCCCAATTGCAACAAAGCTTTTCTCAAAGAGGCCTTTCCTTGGAAGATCTCGTAGCCCTCTCAGGGGGTCACACACTTGGGTTCGCTCACTGTTCATCCTTTCAGAACAGAATACACAAGTTCAGCACCAAACAGAGCATTGACCCATCCATGAACCCATCATTCGCAAACAGCCTCCGAAAAATATGTCCCTCTCACAACAATGTAAGAAATGCAGGGTCCCCTTTGGATTCTAGCTCCAGTTGCTTTGACAATGCTTATTTCAAGCAACTCCTCCAAGGAAAAAGCATATTCTCTTCTGATCAGGCACTGCTCACTCATCCTCACACGAAAGCATTGGTTTCCAAGTTTGCTCATTCCCAAGAGGAAATTAACAGAGCCTTTGTTACGTCCATGATCAAGATGAGCAGCATCGTCAACGGTGGAGGAGGAGAGATCAGGCTCGACTGTAAATTCGTTAGATGA 963 0.4517 MEAIATVMIMLIISTVSFTSLASGLSSNYYDHTCPHVDSIVSSAVHKATTNDKTVPAALLRMHFHDCFIRGCDASVLLESKGKNKAEKDGPPNISLHAFYVIDNAKKAVEAVCPGVVSCADIVALAARDAVTLSGGPTWEVPKGRKDGRISKATETRQLPAPTFNISQLQQSFSQRGLSLEDLVALSGGHTLGFAHCSSFQNRIHKFSTKQSIDPSMNPSFANSLRKICPSHNNVRNAGSPLDSSSSCFDNAYFKQLLQGKSIFSSDQALLTHPHTKALVSKFAHSQEEINRAFVTSMIKMSSIVNGGGGEIRLDCKFVR* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3341 320 PANTHER PEROXIDASE 25-RELATED 9 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g3341 320 Pfam Peroxidase 42 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g3341 320 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g3341 320 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g3341 320 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g3341 320 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g3341 320 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g3341 320 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g3341 320 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g3341 320 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g3341 320 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g3341 320 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g3341 320 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g3341 320 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g3341 320 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g3341 320 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g3341 320 SUPERFAMILY Heme-dependent peroxidases 24 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja5g3341 320 Gene3D - 28 319 - -
Lja5g3341 320 PANTHER PEROXIDASE 64 9 319 - -
Lja5g3341 320 CDD secretory_peroxidase 24 319 IPR033905 GO:0004601|GO:0042744
Lja5g3341 320 Gene3D Peroxidase, domain 2 160 301 - -
Lja5g3341 320 ProSiteProfiles Plant heme peroxidase family profile. 24 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g3341 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3341 Lja-Chr5 64880223 64882621 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3341 5 64880223 64882621 Lja5g3341 5 64880223 64882621 ECH