Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3340 ATGAATAAATTAAAACCGTTTAATATAAAGAATCTTTTCAATGAATTCGTGGCCTGTAGATCACAGAAAGAATGTGACGTGGAAAGGAAGCTAAACGTGAACGAAGAATATCGTGAAGCATTCAGAACAAAGTCTTACATCGAAATATGCAACAAAGCACAAGGCCAGTTAGGGAATACAAGTACCAAAATACCCTCTTCCTCAACACCTTCTTCTTCAGTTCCTTTATGCACGACGCATCTCACTGAGTTTTTGCTTGAACCTCGACAAGAGATTATAACAAACATGAAGGTGCACCGTCTTGTGGTGGACTACTTCGAAGCAAGCTTAGAAGCATGTCGTTGTTGTGACACCATTCTTGAAGCAATCCAATCGACGCGACAAGCTTATCGAAGTCTCACACGTGTTGTTAAGCTAAGCAAAGGAGCCCACCTCGATTGCAAAGCCCAGAAGAATGATGATCATGATATTGATATTGATATCTATAAAGATATTGCTTCCTTTGCCTTGCAAAACAATCCTCTGTCCAACGTTGTTAGCGCCGTGCAGTTCCGTGAAATCCGTGACGGACACATGGCGCTCATGCATAGGCTGATATTGAAAAGAGGGAGAATCAGAAGAAGGTTAAATGTGAAGAGAGTTGGGAAAAACGTTGGAGGAATCGTTCTTGTGACATCACATGGCGTTGTTCTGATTATTCTCTTAGTATTTTGTTTCCACAGCGTGGTTGGGTTGGTGGTCGCACCGAGCATCGTGTGTGGATTAGTTGGTTTGTTCATGAAGAGAATTAGTAAAGCACGTGGTAATAATGAAAAAGTAATTACCACGCGCTCTTCTAATTCTAATTCTGATGAGAGGTTGTGCGAGCAACTTGATGTTGCTGCGAAAGGGGTTTATATTGTGATCAATGATTTGGACACTATGAGCAGGATGGTGAAGAGGTTGCATGATGAGGTGGAGCATAGGAAAACAGTTGCTGGTGTTTGTGTGAGGAATAATGGGAAGTGGGAGATTTTGAAGCGGGTGGTGTGTGAGTTTCGTGACCGGGAGTCTAGCTTTTTGGAGCAGCTGGGAGAGCTTGAGGAACATGTTTACTTGTGCTTTCTCACCATCAACAGGTCCAGGAGGCTCGTTATGCAAGAAATTACGGACACGAAACTCTAA 1164 0.427 MNKLKPFNIKNLFNEFVACRSQKECDVERKLNVNEEYREAFRTKSYIEICNKAQGQLGNTSTKIPSSSTPSSSVPLCTTHLTEFLLEPRQEIITNMKVHRLVVDYFEASLEACRCCDTILEAIQSTRQAYRSLTRVVKLSKGAHLDCKAQKNDDHDIDIDIYKDIASFALQNNPLSNVVSAVQFREIRDGHMALMHRLILKRGRIRRRLNVKRVGKNVGGIVLVTSHGVVLIILLVFCFHSVVGLVVAPSIVCGLVGLFMKRISKARGNNEKVITTRSSNSNSDERLCEQLDVAAKGVYIVINDLDTMSRMVKRLHDEVEHRKTVAGVCVRNNGKWEILKRVVCEFRDRESSFLEQLGELEEHVYLCFLTINRSRRLVMQEITDTKL* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3340 387 PANTHER UPF0496 PROTEIN 2-RELATED 20 385 - -
Lja5g3340 387 Pfam Protein of unknown function (DUF677) 82 382 IPR007749 -
Lja5g3340 387 PANTHER UPF0496 PROTEIN 3-RELATED 20 385 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3340 Lja-Chr5 64871143 64873617 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3340 5 64871143 64873617 Lja5g3340 5 64871143 64873617 ECH