Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3337 ATGTTATTATTAGTTGTTTCATGCTGCAAAACAAAGGGTGTTATAAAACTGCCTCCAAATGTTTCCATTCCAGCAGTTTTGGTGTTTGGAGATTCGATCATGGATACTGGCAATAACAACAACTTGGTAACGATAGCTCGCTGCAATTTCCGACCATATGGGGAAGATTTTCATGGAGGTGTCCCAACTGGCCGATTTAGCAATGGAAAAGTTCCCTCAGACTTTGCAGTTGAAGAATTAGGCATCAAAGAATTACTACCGGCATACCTGGATCCAAATCTCCATCCTAGTGAACTGGCCACCGGCGTGAACTTTGCATCAGGCGGCGCTGGATACGATCCTATGACAGCAAAATTACAGCAAGTTTTAACATTATCGGACCAACTACAAAATTTCAAAGATTACATACAAAAGTTGAATGCGTCTGTTGGACCACAAAAAGCAGCTTCCATCGTGTCCAACGGCTTGTACCTTTTTTCAGCAGGGAACAATGATATTGCACTTACCTACACTTTGAACTTTGCCGGTAGCACGTCGCAAAATTTCACTAGCTATGCTGATAGCTTAGTTGGCTGGGGTTCAAATTTCCTCAATAATTTGTATCAACTCGGAGCACGACATGTGTGGGTTTTAAGCACATTGCCCCTAGGATGCTTGCCCGGACCTAGATCTGTAAAAGGTGGACTTTTTAGAGTGTGCTCAAATGACATCAATGATGAAGCGCAATTCTTCAATACCAAGTTAAAGGAAGAGGTTTCCACATTGAAAAATCAACCCAACCTTCCGAATTTCGATGTTACGTTCATTGATGTCTATAATCCTATGATGAACCTCATACAAAATCCTTCAAGTCAAGGGTTTACAAACATAGACAGCGGGTGTTGTGGGACTGGGTTATTGGAAACCGCATTGCTATGTAACGCGTTGAGCGTTTTATGTCAAAATACATCAGAATACTTATTCTGGGATTCTGCCCATCCAACTCAGAGAGCTTATGAGCTTATTGTCGATGATATACTAAAAGCAAACAATATTCCAAGGTTCTTGGCTGATTCTCGTGCAAATTCTACCTAG 1074 0.4143 MLLLVVSCCKTKGVIKLPPNVSIPAVLVFGDSIMDTGNNNNLVTIARCNFRPYGEDFHGGVPTGRFSNGKVPSDFAVEELGIKELLPAYLDPNLHPSELATGVNFASGGAGYDPMTAKLQQVLTLSDQLQNFKDYIQKLNASVGPQKAASIVSNGLYLFSAGNNDIALTYTLNFAGSTSQNFTSYADSLVGWGSNFLNNLYQLGARHVWVLSTLPLGCLPGPRSVKGGLFRVCSNDINDEAQFFNTKLKEEVSTLKNQPNLPNFDVTFIDVYNPMMNLIQNPSSQGFTNIDSGCCGTGLLETALLCNALSVLCQNTSEYLFWDSAHPTQRAYELIVDDILKANNIPRFLADSRANST* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3337 357 CDD SGNH_plant_lipase_like 24 340 IPR035669 -
Lja5g3337 357 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 8 343 - -
Lja5g3337 357 PANTHER GDSL ESTERASE/LIPASE EXL3 8 343 - -
Lja5g3337 357 Gene3D SGNH hydrolase 17 346 IPR036514 -
Lja5g3337 357 SUPERFAMILY SGNH hydrolase 25 342 - -
Lja5g3337 357 Pfam GDSL-like Lipase/Acylhydrolase 26 338 IPR001087 GO:0016788
Lja5g3337 357 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 26 37 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3337 Lja-Chr5 64823405 64848621 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3337 5 64823405 64848621 Lja5g3337 5 64823405 64848621 ECH
Lja5g3337 5 64823405 64848621 Lja1g3485 1 43452276 43457204 PCT