Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3336 ATGAAGCCCCTTTGTCTTTCTTCTCCTTATGTTCTTCCTTCCTTACTTATCCGTTTCTTGTTAATATTTATCGTGACCTTGAAAACAATGGCGTTGGTGAAACTGCCACCAAATATTTCAGTTCCAGCACTTTTGGTGTTTGGAGATTCGATTGTAGACACTGGCAACAATGACAACAACTTGCTAACAAGTGCTCGTTGCAATTTCCCACCATATGGTAAAGACTTTAAGGGAGGAATGCCAACCGGCAGATTTAGCAACGGAAAGGTGCCGTCTGACATTATAGCTGAAGAATTAGGCATTAAGGAGCTTCTACCAGCATACTTGGATCCAAAATTGCAACCTCATGAGTTACCAACTGGAGTGTGCTTTGCATCCGGTGGCGCAGGATATGATCCTGTGACATCAGAAACTGCGGCTGCTATTTCTTTAACCGGTCAACTAGACTTGTTCAAAGAGTACACAAGCAAGTTAAGAGGACTAGTTGGAGAGAACAAAACAAACTTCATCCTAGCCAACAGTGTTTTTCTTGTGGTCTTTGGTAGCAATGACATTGCCAACACATACTTCTTGTCGCGAATTAGACAAGTGCAATATGATTTTCCTTCTTACGCTGACTTCATAGTCCACTCAGCTTCTGATTTCTTAAAGGAATTGTATCAACTAGGGGCACGGAGGATTGGAGTATTCAATGCACCTCCACTTGGGTGTGTACCATCTCAGAGAACAGCAGCCGGTGGAACAACAAGAAAATGCGTAGCAAGGTACAATGAAGCGGCAGAGTTATTCAATAGTAAACTATCAAAGGAGATGAAATCTCTTAACCAAAAATATCCAAACAGCAGGATGGTTTACATTGATGTTTACAACCCACTCCTTGACATCATTATTAACCACAAAAAATATGGGTATAATGTCGAAGACAAAGGATGTTGTGGCACAGGATTAATAGAGGTTGTGTTTTTATGCAACCGCTTGGTTCCTACATGTCCCAACGTTTTGGAGTATGTTTTTTGGGATAGTTTTCACCCTACTGAAAGTGCTTACAAAAAGATTGTAGCTCCTATACTCGAAAAATATGTGAAGGATTTCGTGTGA 1098 0.4089 MKPLCLSSPYVLPSLLIRFLLIFIVTLKTMALVKLPPNISVPALLVFGDSIVDTGNNDNNLLTSARCNFPPYGKDFKGGMPTGRFSNGKVPSDIIAEELGIKELLPAYLDPKLQPHELPTGVCFASGGAGYDPVTSETAAAISLTGQLDLFKEYTSKLRGLVGENKTNFILANSVFLVVFGSNDIANTYFLSRIRQVQYDFPSYADFIVHSASDFLKELYQLGARRIGVFNAPPLGCVPSQRTAAGGTTRKCVARYNEAAELFNSKLSKEMKSLNQKYPNSRMVYIDVYNPLLDIIINHKKYGYNVEDKGCCGTGLIEVVFLCNRLVPTCPNVLEYVFWDSFHPTESAYKKIVAPILEKYVKDFV* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3336 365 Gene3D SGNH hydrolase 37 361 IPR036514 -
Lja5g3336 365 Pfam GDSL-like Lipase/Acylhydrolase 44 354 IPR001087 GO:0016788
Lja5g3336 365 SUPERFAMILY SGNH hydrolase 44 360 - -
Lja5g3336 365 Coils Coil 257 277 - -
Lja5g3336 365 PANTHER GDSL ESTERASE/LIPASE EXL3 26 361 - -
Lja5g3336 365 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 44 55 IPR008265 GO:0006629|GO:0016298
Lja5g3336 365 CDD SGNH_plant_lipase_like 42 360 IPR035669 -
Lja5g3336 365 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 26 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3336 Lja-Chr5 64802783 64808999 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3336 5 64802783 64808999 Lja5g3336 5 64802783 64808999 ECH
Lja1g3485 1 43452276 43457204 Lja5g3336 5 64802783 64808999 PCT