Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3330 ATGACTCTTGAGGATTTCTTTACCTTGACTGAGATGAAAGATGGGCTCACAGCCTCTTCTCGAGTACAGGAGTTGATCACTGTTATGAAAAAGGAGCAAGATTGTGTTGTTAAGAATGCTGGTGATGCAATAAGGCAGTGGGCTGCCGTCGCTAGCACTATTGCTGCTACACAGAATAAAGATTGTCTTGATCTTTTTATTCGTTTAGATGGAGTTTGGTACATCAATAGATGGTTAAATGATGCTCAAAATTTTGTTGTTGATGAACATGAAGGCTTACTTGAAGAGTCAATTACTGCAATGTTACGAGCAGTTGAAAAGCTGTATCAAGACTGTGAGATGTCAATTTCGTCAGAAATTCGGGTAACTGTAAGTAACCTTCTTGGTCATCAGAGCTCTAAGGTTCAGGATAGAGCAAGAGTATTATTTAGCAACTGGAAAGAAGGTGGAAATGGAGATACTGAATCTCATGAGACAGATATTTGTAAGATGAACAATGTGAATGATAAGATTGGTTGGGAGGAAGTCCAGCTGTCTTCCGTGAAAGAAGCTAACAATGATGATGATAAAGCCGCACAACTTGTTGGAGGTGAGAAGTCCCAATTGAGAAGCTCAGATAGTCAGCTACAAGAAAAGGTTGCTAGTGTACAGATACAGAGTTCTGATGATGCGCTCCAGTCCTCCGTATCTTTGGGTTGTGAAGATGCCAAAGAGAGATCAAACCATCTTGCCAGTGTTTCAGCTTCTAATCAACAAGTCACTCCCATGAGTGAAGCCGAGATGACATCATCTGGGACCTGTAACCTACCTGTTCCAAAACAAGGCAGTTGCGAAGGACAGCCAGATGATTTACAGATAAATAATGTATGTAAAAAGGAGAAGCAAAACCAAACTGACAATGGCCCTCCAGAAAAATTAGGGACACCTGATATTTCTTTAGCACCAATAAACCCTGAGACTGTTCCTGTTTCTATTGGTGCTAATGAAGCACCAATAAAGCCTGAGTCTGGTTCAGAGCATGTTGAAGGCAATGATGATGGTGTTTGTCATAAAATAATTGTTTCTGGCAGCATGAGAACACCCGCACCTGATAGTATGAGTGATACTAGCGCTATAAATTCTGGCAATCCACAACTGCCCAGATCTTCGGAAAACAGTGATGGCTGTTGCTCTGATACGTTGCAGGACTTGTCAATCAGTGGCATTAAGTTGGAAAAGGCTGAGGTTAAGATGTCTATCCTCGAAACAGAGCATGGCAGTGCTGTAAAGGAGGAAGGCAAGGGCCAATTTTCTAATCAAGACGACAAGACTTCAAATGGTTCTGATTCTTTTAAAAGGTGGAAAGCTACCAGGAGCCCTCTTGTTGACAAAATTTCTGACATTGAACTTGAATATGGTACTGTTGATGCTTTAGAATTTGCGCGACAAGTTGCTCAGGAAGTTCAGAGAGATATCCACAGCTCTTCTTCAGAGAAAATCTCAGAAGGCAGGATCAGGCGATCTAGCAGCACAGATTCTATCAGTAAAAAGGATGAACTTGCTGAAGTCAAACCTGAGGAGGTATCATCCAGACAAAGCAACTCTGCTGAGGCATGCTCTGAAGAGGAGGGGCTTAGGAATGTTTCAGATGATATTGTGGCTGAGCCAGAATGCATCCCTGACTTGGAGTCCTCGCAGGTTACTGAAGCAGCTCGAGATCCAGGAGGTTATTCAGAGAAAAGCCTCTGTACGTTTGATCTCAATGAAGAAGTTGGTTCTGATGATCTAGATGTTTCTGCAAATAGTATGACTACCGCACCAATATCTGTTGTCTCAGCTTCAAAGCCTGCACAGACTTCTGGCTTGCTAACAGCCCCTTTACAATTTGAGGGAACACTTGGAGGATGGAAAGGATCTGCTGCCACTAGTGCCTTTCGTCCTGCATCACCTCGTAAAAAATCTGATAGTGAGAAGAACGTTTCTGTTGGTGGGGGCACTGATATTTCCAAACAGAGGCAGGTATGCCTTGATATTGATTTGAATGTGGCTGAGGGTGAAGAAGGATTAGTAAAACAAATTGGTCAATTCCCAGACCTTCCTTCTGGGCAATCATCAGAGGAACTTAGTCCTAAAAGACCGGGAAGGTTTGAATTGGACTTAAACAGTGTTGGTGATGATGGTGATACCCAACCTTCAAATCATAGGATGGAGGGGAAACTCTTTCCTGTAAGAAATGGCTATTGGAGCCCATCACCTGCATCGTCGTCATCGTCAATGCAGCCTTATGTTCGAAACATCGATTTGAATGACAGACCATTCTTTCAAACTGATTTAGTGGACCAGGGGCCTGCTAAGTCATCTCCAAATATTGAAGCATATGGACATCCTAAATCAGCTCCCATGATCTCTATTTTGGGTGCCAAGGTGGAAGTGGCTAGAAGAGAGTATGTTCCTCAGAATTGGTCTTTACCAAATGGCAAGGCTATTGAGCCTGCAATTGATCTTACAATGTCAGGATCAAGTCAGTTTTTAGGGCTGGGCCCCGTGGTATCCGACAATCATTCAACTGTTTTTGGATATAATCAACTGACCTCAACCCCGCCCCCCTTGTCTTTTTCTTCAGCCATGTATGGATCAGGTGGCACAATTCCATACATGGTGGACTCAAGAGGAGCTCCAGCTGTGCCTCAAGTTGGGGGGTCAACCGTCCTTTCATCTTACAATCAGCCTCCATTTATTATGAGCATGACCGGGACACAACTTGGTTTAAATGGTGTTGGATCTTCACATCCCCACTTTGATCTTAACTCTGGCTTCTTGGTTGATGGTGGGAATAGAGATGCATTGGCTGGAAGGCCATTTTTCTTTCCTGCTCAGGGCAGAGCTATGGAGGAGCATGTAAGGAGCTTTCCACAATCCTCAAGTTCTTCAGTGGTTAGTGGGAAAAGAAAAGAACCAGACGGTGGCTGGGAAACCTATCCACCTAGCTACAAACATCAGCAACCTCCATGGAAGTAG 2997 0.4358 MTLEDFFTLTEMKDGLTASSRVQELITVMKKEQDCVVKNAGDAIRQWAAVASTIAATQNKDCLDLFIRLDGVWYINRWLNDAQNFVVDEHEGLLEESITAMLRAVEKLYQDCEMSISSEIRVTVSNLLGHQSSKVQDRARVLFSNWKEGGNGDTESHETDICKMNNVNDKIGWEEVQLSSVKEANNDDDKAAQLVGGEKSQLRSSDSQLQEKVASVQIQSSDDALQSSVSLGCEDAKERSNHLASVSASNQQVTPMSEAEMTSSGTCNLPVPKQGSCEGQPDDLQINNVCKKEKQNQTDNGPPEKLGTPDISLAPINPETVPVSIGANEAPIKPESGSEHVEGNDDGVCHKIIVSGSMRTPAPDSMSDTSAINSGNPQLPRSSENSDGCCSDTLQDLSISGIKLEKAEVKMSILETEHGSAVKEEGKGQFSNQDDKTSNGSDSFKRWKATRSPLVDKISDIELEYGTVDALEFARQVAQEVQRDIHSSSSEKISEGRIRRSSSTDSISKKDELAEVKPEEVSSRQSNSAEACSEEEGLRNVSDDIVAEPECIPDLESSQVTEAARDPGGYSEKSLCTFDLNEEVGSDDLDVSANSMTTAPISVVSASKPAQTSGLLTAPLQFEGTLGGWKGSAATSAFRPASPRKKSDSEKNVSVGGGTDISKQRQVCLDIDLNVAEGEEGLVKQIGQFPDLPSGQSSEELSPKRPGRFELDLNSVGDDGDTQPSNHRMEGKLFPVRNGYWSPSPASSSSSMQPYVRNIDLNDRPFFQTDLVDQGPAKSSPNIEAYGHPKSAPMISILGAKVEVARREYVPQNWSLPNGKAIEPAIDLTMSGSSQFLGLGPVVSDNHSTVFGYNQLTSTPPPLSFSSAMYGSGGTIPYMVDSRGAPAVPQVGGSTVLSSYNQPPFIMSMTGTQLGLNGVGSSHPHFDLNSGFLVDGGNRDALAGRPFFFPAQGRAMEEHVRSFPQSSSSSVVSGKRKEPDGGWETYPPSYKHQQPPWK* 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3330 998 MobiDBLite consensus disorder prediction 481 543 - -
Lja5g3330 998 MobiDBLite consensus disorder prediction 418 444 - -
Lja5g3330 998 MobiDBLite consensus disorder prediction 631 659 - -
Lja5g3330 998 MobiDBLite consensus disorder prediction 959 998 - -
Lja5g3330 998 MobiDBLite consensus disorder prediction 687 727 - -
Lja5g3330 998 MobiDBLite consensus disorder prediction 359 388 - -
Lja5g3330 998 MobiDBLite consensus disorder prediction 240 267 - -
Lja5g3330 998 MobiDBLite consensus disorder prediction 293 315 - -
Lja5g3330 998 MobiDBLite consensus disorder prediction 485 519 - -
Lja5g3330 998 MobiDBLite consensus disorder prediction 242 267 - -
Lja5g3330 998 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED 1 998 - -
Lja5g3330 998 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 61 156 IPR035441 -
Lja5g3330 998 MobiDBLite consensus disorder prediction 360 388 - -
Lja5g3330 998 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN 1 998 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3330 Lja-Chr5 64740917 64748764 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3330 5 64740917 64748764 Lja5g3330 5 64740917 64748764 ECH