Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3323 ATGGCCATCTCCAAGACTCTGTTCGCTCCAATCCTCATTTCTCTCATCCTTTTGCACCTTGTTGAATCAAATGCCAGGATGGGCAACACCATGGTGGAGAGCCCAAGTCCCAGCCCAAGTCCAAGTCCTTCCTCATCAATCATGGATTGTGGCAGCGCTTGTGATGAGAGGTGCAAGTTATCTTCAAGGCCAAATCTATGTAAGAGAGCGTGTGGGACTTGCTGTGAGCGGTGCAATTGCGTGCCTTCGGGGACTTACGGTCACTATGAAGAGTGTGCTTGTTATGCCAACATGACCACCCACGGTGGTAGGCGCAAGTGCCCTTAA 327 0.5107 MAISKTLFAPILISLILLHLVESNARMGNTMVESPSPSPSPSPSSSIMDCGSACDERCKLSSRPNLCKRACGTCCERCNCVPSGTYGHYEECACYANMTTHGGRRKCP* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3323 108 Pfam Gibberellin regulated protein 49 108 IPR003854 -
Lja5g3323 108 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 108 - -
Lja5g3323 108 MobiDBLite consensus disorder prediction 29 51 - -
Lja5g3323 108 PANTHER SNAKIN-2-LIKE 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3323 Lja-Chr5 64396828 64397613 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3323 5 64396828 64397613 Lja5g3323 5 64396828 64397613 ECH
Lja1g3501 1 43618651 43619645 Lja5g3323 5 64396828 64397613 PCT