Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3312 ATGGACAGACGCTGGCCTTGGAAGAAGAAATCAACTGACAAGGCTGTGCTTGACAAAGCAGCTGCTGAATTGGACTCTTCTGCTAGTGCTACCACTCAGAGCAATCAGGATGCTTACAAGAAGCCAAACTATGTGCAAATCTCTGTAGAATCATATTCACATCTGACTGGTCTGGAGGATCAAGTGAAGACATATGAAGAAAAAGTTCAGACACTAGAGGATGAGATCAATGAATTGAATGAGAAACTGTCAGCAGCAAACTCAGAGATAAATACTAAGGAAGGCTTGGTAAAACAACATGCTAAAGTGGCTGAAGAGGCTGTCTCAGGCTGGGAAAAGGCGGAAGCAGAAGCTTTGGCTTTGAAGAACCATCTAGAAACTGTCACCCTTTCGAAACTCACTGCTGGGGACCAGGCATCACAGTTAGATGGTGCTCTTAAAGAGTGTATGCGACAGATAAGAAACTTGAAGGAAGAACATGAGCAGAAAATACAGGAAATTGCTCTCACAAAAACCAAGCAATTGGACAAGGTTAAGGGTGAGCTTGAGGCTAAGATAGGGAACTTTGAACAGGAACTTCTCAGGTCTGCTGCTGAGAATGCGGCTCTGTCGAGGTCCTTGCAGGAGCGCTCTAACATGCTAATCAAATTAAGCGAAGAAAAAGGTCATGCTGAGGCTGAAATTGAGCATCTTAAGAGCAACATAGAATCATGTGAGAGAGAAATCAATTCACTCAAATATGAGCTTCATGTTAATTCCAAAGAGCTTGAAATTCGCAATGAAGAAAAAAATATGAGTATGAGGTCTGCAGAAGCTGCTAACAGGCAGCATACGGAAGGTGTTAAAAAAATTGCTAAATTAGAGGCAGAATGCCAAAGATTACGTGGTTTAGTACGGAAAAAGTTACCTGGTCCTGCTGCTCTTGCACAAATGAAGCTAGAAGTTGAAAGTCTTGGTCGAGATTATGGAGAAACTCGTTTAAGGAAGTCTCCTGTCAAACCTGCTAATTCTCATCTGTCCCAGTTGCCTGAATTATCCCTGGAGAATGTACAGAAATTCCAGAAAGATAATGAATTTCTTACAGAGCGCTTATTGGCAATGGAAGAAGAAACAAAAATGCTAAAAGAAGCTTTGGCAAAACGCAACGGTGAATTGCAGGCTTCAAGGAGCATGTGTGGTAAAACACTAAGCAAACTTCAAATGTTGGAAGCACAACTTCAGACAAGTAATCAGCAGAAGGGATCCCCAAAATCCATCGTCCATATAAACCATGAAAGCATCTACAGTCAAAATGCAAGCAAAGCACCAAGCTTGATCTCCATGTCTGAAGATGGAAACGATGATGCAGGAAGTTGTGCTGAGTCTTGGTCTGCAGGAATGATTTCTGAGCTATCCCAACTTCCAAAAGAAAAGAATACTGAGGAATTGAGCAAATCTGAAGCCACTAAGAAGCTAGAACTAATGGATGACTTTCTGGAGGTGGAGAAATTGGCTGGATTATCAAATGATTCAAATAGAGAAGCCTCTGTTTCATTTACTTCAAACAATAAGATGAATTCAATTGTGACCAGTGATGTATCAGAAGTCAGTGCCAGCAAAGATGATCCCTTCGAGTCTGAAACGAAGTGTGATTCAAATCTGTTGCCAAATCAAGTGTCTTCTTCTGAAGCAGATGGCTTGTTGTTAGCAGAACTTAGATCAAGAATATTATTGGTTTTTGATTCCAAGGCTAAGGGTGACGATATAGGGACGATCCTGAAGGATATTAAACATGCTCTTGAAGATGCACATGACTCTTCCATCCAGGACTCTGTAACTCCCATTCCCTGCGATGTCAAGCCTTCTGATACATGTGATAAGCAGGTTAATCCTGAAGATGCTGACCAAAATTCAGAAAAAGAATCCATTTTGTCCCAGAAAACTACAGAACTTATGCAGATAACTTCTGATCTAGAAGCTGCAATCTCTCAGATTAATGACTTCGTATTGTTTCTTGGGAGAGAAGCAATGACAGTTCATGATATATCTTCTAGTGGAGAAGGAATAAGCCAAAAGATGGAGGAGTTCTCTGTCACTTATAATAAAGTTATATGCAATGAAGCAAATTTGCAACAGTTCGTTCTTGATCTGTCTTGTGTATTAGCTAAAGCATGTGAATTTAGATTTAATATCCTTGGTTATAAGGGTATGGAAACTGAAACCAATAGTCCTGATTGCATAGATAAGATTGCTCTGCCTGAAAATAAGTTAGTTCAAGACAACTCACCAGGAGAGAGATATCAAAATGGTCATTCCCATATTCTTAATCCTTGTTCTGATCCTGAGGTTCCTGATGATGGAAACTTGACCACAAACTATGAATCAAATGGCACATCACAGAAGTTCTCGATGAAGGATTTTGAAGAAATGAAATTAGAGAAAGAGAAGGCCATGGCAGATCTGTCAAAATTTGCTGAAAATCTTGAAGGGACAAAGTCTCAATTAATGGAGACCGAGCAAAATCTGGCAGAAGTTAAATCACAATTGGCTTCTGCTCAAAAGTCAAACAGCTTGGCTGAGACTCAATTAAAATGCATGGCAGAGTCATACAGGTCACTTGAAACACGTGCACATGAGTTTGAAACTGAGCTGAATCATCTTCGAATGAAGACAGAAACGCTAGAGAACGAACTTAAAGATGAAAAGAGGGCTCATGAAGAAGCTTTGGCGAAGTACATGGAGCTAGAAGAACAACTGCAAAGGAATGAGAGCTCCGCTGCTGATAATGACCCCAAGACCAAGAAGGAGAGAGACTTGGCAGCCGCTGCTGAAAAGCTAGCTGAGTGCCAGGAAACTATATATCTTCTTAGCAAGCAGTTAAAGTCTCTGCATCCTCAAACAGAGCCAACGGGTTATGCATACGGTGAGAGGATTTCAAAGGTAGAAGGCTTCACAGAGCGTGAATCTGCTACTTATAGCCCAAATTTGCAAGAGTTTGATCAGGCGGAGATGGACGGTGCTGCTTCTGGTTTTGTGCAGAGACTGGGTCCTGAGTCCCCCTTGCACTTTTCTAACAACTTACGCAGTCCATCCGATACTGAATCAAACTTTCAAGCCACATCTCCTGTACGGAACCCAAACCATAGGCCTACAAAGTCAACCTCTTCATCAGCTTCTTCAACTCCTACACCAGAGAAACATGCCCGGGGTTTTAGCAGATTCTTTTCATCAAAAGGAAAAACTGGTCATTGA 3231 0.4132 MDRRWPWKKKSTDKAVLDKAAAELDSSASATTQSNQDAYKKPNYVQISVESYSHLTGLEDQVKTYEEKVQTLEDEINELNEKLSAANSEINTKEGLVKQHAKVAEEAVSGWEKAEAEALALKNHLETVTLSKLTAGDQASQLDGALKECMRQIRNLKEEHEQKIQEIALTKTKQLDKVKGELEAKIGNFEQELLRSAAENAALSRSLQERSNMLIKLSEEKGHAEAEIEHLKSNIESCEREINSLKYELHVNSKELEIRNEEKNMSMRSAEAANRQHTEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGRDYGETRLRKSPVKPANSHLSQLPELSLENVQKFQKDNEFLTERLLAMEEETKMLKEALAKRNGELQASRSMCGKTLSKLQMLEAQLQTSNQQKGSPKSIVHINHESIYSQNASKAPSLISMSEDGNDDAGSCAESWSAGMISELSQLPKEKNTEELSKSEATKKLELMDDFLEVEKLAGLSNDSNREASVSFTSNNKMNSIVTSDVSEVSASKDDPFESETKCDSNLLPNQVSSSEADGLLLAELRSRILLVFDSKAKGDDIGTILKDIKHALEDAHDSSIQDSVTPIPCDVKPSDTCDKQVNPEDADQNSEKESILSQKTTELMQITSDLEAAISQINDFVLFLGREAMTVHDISSSGEGISQKMEEFSVTYNKVICNEANLQQFVLDLSCVLAKACEFRFNILGYKGMETETNSPDCIDKIALPENKLVQDNSPGERYQNGHSHILNPCSDPEVPDDGNLTTNYESNGTSQKFSMKDFEEMKLEKEKAMADLSKFAENLEGTKSQLMETEQNLAEVKSQLASAQKSNSLAETQLKCMAESYRSLETRAHEFETELNHLRMKTETLENELKDEKRAHEEALAKYMELEEQLQRNESSAADNDPKTKKERDLAAAAEKLAECQETIYLLSKQLKSLHPQTEPTGYAYGERISKVEGFTERESATYSPNLQEFDQAEMDGAASGFVQRLGPESPLHFSNNLRSPSDTESNFQATSPVRNPNHRPTKSTSSSASSTPTPEKHARGFSRFFSSKGKTGH* 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3312 1076 Coils Coil 350 377 - -
Lja5g3312 1076 Coils Coil 55 96 - -
Lja5g3312 1076 MobiDBLite consensus disorder prediction 531 550 - -
Lja5g3312 1076 SUPERFAMILY Tropomyosin 798 962 - -
Lja5g3312 1076 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1076 - -
Lja5g3312 1076 Coils Coil 863 918 - -
Lja5g3312 1076 Coils Coil 253 290 - -
Lja5g3312 1076 MobiDBLite consensus disorder prediction 613 635 - -
Lja5g3312 1076 MobiDBLite consensus disorder prediction 618 633 - -
Lja5g3312 1076 MobiDBLite consensus disorder prediction 1012 1059 - -
Lja5g3312 1076 Pfam Filament-like plant protein, long coiled-coil 93 962 IPR008587 -
Lja5g3312 1076 MobiDBLite consensus disorder prediction 911 932 - -
Lja5g3312 1076 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 1076 - -
Lja5g3312 1076 MobiDBLite consensus disorder prediction 432 453 - -
Lja5g3312 1076 Coils Coil 800 855 - -
Lja5g3312 1076 Coils Coil 214 248 - -
Lja5g3312 1076 Coils Coil 139 173 - -
Lja5g3312 1076 Coils Coil 925 945 - -
Lja5g3312 1076 MobiDBLite consensus disorder prediction 1005 1076 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3312 Lja-Chr5 64295927 64301507 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3312 5 64295927 64301507 Lja5g3312 5 64295927 64301507 ECH
Lja5g3312 5 64295927 64301507 Lja1g3514 1 43848915 43854443 PCT