Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3307 ATGGGTTCTGTTTCTCTGAAAATAGGAGATGGAACAGCCAGATTCAAAAGAGCAACTCTGTGTTCTTCAGCTGTCAACATTCTCATGATTTTCTCTGTCATCACCACCAATCTCTTTGCTCTCTATGCTTTCACTGCTTCACCAAAACCAAATCACCAACTCCTCCACCATGCCCACAAGAACATCTCCATCATCTCAGAGCAGGTCTCACTCATACTCAGAGAGATCGATTTATCTCAGAAGCAACTAGCCCAGATGGAAAAAGAGCTTCTTGGCTACGAAAGCATTGATCTTTCAAGACCCAATATCGCAAACGAGCTCAAAATCTTCCTCCAGCGCCACCAGCTTCCTCTGGGGAAAGATTCAAGAACTGGGATCACTGAAATGGTGCCATCTGTGGGCCACTCCTGTGAGAAATCTTCAGACTTGTTGTCTCAGTACATGAGTTACAAGGCTTCTGGATCTTGCCCTGATGATTGGAGTTTAGCTCAGAAGCTGATTTTAAGAGGGTGTGAGCCTTTGCCAAGAAGAAGGTGTTTTTCTAAAACTGTTTCCAAGGTAGGACTTTCCCCTTTTCCTGATTCTCTTTGGATAAATGTTGGTAACAAGACAGTTAATTGGAGTGGTCTCAATTGTAAGAATTTTGAATGTTTGAATGGAAAAAAATTGAGCAGAGATTGCATTGGTTGCTTTGATTTGGTTAGTAGCAATGAGAATCAGAGATTTGTCAAAGGTAAAAGTAAGAATGATTTTGTGGTTGATGATGTCTTAGCATTGGGGAGTGGTGGAATTAGAATAGGGCTTGACATTGGTGGAGGGTCTGGATCCTTTGCTGCTAGGATGGCTGATAGGAATGTTACTGTAGTTACTAACACTCTGAACATTGATGCCCCATTCAGTGAGTTCATTGCTGCAAGAGGGCTTTTCCCACTTTACTTGAGCTTGGATCATAGGTTCCCTTTCTATGACAATGTGTTTGATCTGATCCATGCTTCAAGTGCATTGGATGTTGGAGGGAAGCCAGAGAAGTTGGAGTTCTTGATGTTCGACATTGATCGGGTTTTACGCGCCGGTGGTTTGTTATGGCTGGATAACTTCTTTTGTGCCAATGAAGAGAAGAAACAAGCTTTGACAAGGTTGATTGAAAAGTTTGGATATAAAAAATTGAAGTGGGTTGTGGGAGAGAAGGTTGATAGTTTTGGGTCAGGGAAGCCTCAAGTGGTGTTATCTGCAGTGCTTCAGAAACCTGTTAGAGCTTAA 1260 0.4238 MGSVSLKIGDGTARFKRATLCSSAVNILMIFSVITTNLFALYAFTASPKPNHQLLHHAHKNISIISEQVSLILREIDLSQKQLAQMEKELLGYESIDLSRPNIANELKIFLQRHQLPLGKDSRTGITEMVPSVGHSCEKSSDLLSQYMSYKASGSCPDDWSLAQKLILRGCEPLPRRRCFSKTVSKVGLSPFPDSLWINVGNKTVNWSGLNCKNFECLNGKKLSRDCIGCFDLVSSNENQRFVKGKSKNDFVVDDVLALGSGGIRIGLDIGGGSGSFAARMADRNVTVVTNTLNIDAPFSEFIAARGLFPLYLSLDHRFPFYDNVFDLIHASSALDVGGKPEKLEFLMFDIDRVLRAGGLLWLDNFFCANEEKKQALTRLIEKFGYKKLKWVVGEKVDSFGSGKPQVVLSAVLQKPVRA* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3307 419 Coils Coil 69 89 - -
Lja5g3307 419 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 1 418 - -
Lja5g3307 419 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 221 388 IPR029063 -
Lja5g3307 419 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 260 363 IPR004159 GO:0008168
Lja5g3307 419 Gene3D Vaccinia Virus protein VP39 226 398 IPR029063 -
Lja5g3307 419 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 1 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3307 Lja-Chr5 64096819 64098649 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3307 5 64096819 64098649 Lja5g3307 5 64096819 64098649 ECH
Lja5g3307 5 64096819 64098649 Lja1g3518 1 43880788 43882400 PCT