Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja5g3302 | ATGGCGGTGCTTGTTCTTCTTTCTTTCTTATCTATCATCATCATATTCATTGTTCACAAATTCATAACATATAGTGCAAGAGCTTCTCTTCCACCTGGTCCTCTAGGTCTTCCTCTCATTGGCAATATACACCAACTTGATGCCTCATCCCCACATAGCTCTCTATGGAAACTCTCCAAACGCTATGGACCTCTCATGTCATTGCGCCTTGGCTGTGTGCCATGTTTGGTGGTTTCCTCAGCAAAAATGGCCAAGGAAGTCTTGAAAACCCATGACCTCAAGTTTGCAAGCAGGCCACCTTTCCTTGGCCTAAGGAAATTTTCTTACAATGGCTTAAGACAAATTAAGAAACTTTGTATCATCCACCTCTTCAGCTCTAAACGTGTCCAATCCTTTCGACCTATAAGAGAAAATGAAGTTGCCCAAATGATTCACAAAGTTTCAAAATATGATGCTTCAGGCAAAGCAGTGAACTTGACTGAAACATTGATGTCTTTCAATAGCTCCTTAATATGCAGGATAGCTTTTGGTAAAAAGTATGGCTGTGATTATGAGGAAGAAGCTGGTCTAGGAAGTGGCCAAAGGAAGAGTAGAATGCACATGCTGCTCAATGAGGCCGAAGCTTTGTTTACAGAGTTTTATTTTTCAGATTATTTTCCATTGATAGCGTGGGTTGATAGACTGAGAGGAACTCTGTGGAAGCTAGACAAAGCCTTCAAGGAGTTAGATATGATCTACGAGCAAGTTATCCAGGACCACATGGATCTAACCAGGCCTAAAACTAGTGACAAAGAAGTAGCAGACATTATTGATATTTTTCTGGAGATTATGAACAATCACTCACTCTCTTTTGATCTCACTATCGACCATATAAAAGCCGTTCTTATGAACATCTTTATAGCAGGAACAGACACAAGTTCAGCCTTAGTAGTTTGGGCTATGACATCACTATTGAAGAATCGTAGAGTGATGAATAAGGTTTACGGGGAAATCAGAGACTTATTTGGGGACAAAGATTTTATAAGCGAAGATGAAATTGAAAAGCTTCACTATTTTAAAGCAATGGTAAAAGAGGCATTGAGGTTGTTCCCACCAGCACCATTACTTCTACCAAGGGAAACAATAGAAAGTTGCAACATAGATGGGTATGAGATTCCAGCAAGAACTTTAGTGCATGTTAACGCTTGGGCAATAGCAAGAGACCCTGAGATCTGGGAAGACCCTGAAGAATTTTACCCTGAAAGGTTCCTTGGGAGTTCAATAGATTTCAAGGGGAGAGACTTTGGGTTTATTCCTTTTGGAAGTGGAAGGAGAATTTGTCCAGCGATGAACATGGGAGTGGCCACGATTGAGCTTTCACTAGCTAATCTTCTCCACTCGTTTGATTGGGATGTTCCTCCAGGAATTCATAAGGAAGAGATGTTGGACACACAAGTGATCCCAGGATTAACAATGCACAAGAAAATTGATCTTAACCTTATTGTCAGGAAGCGATCAACATAG | 1503 | 0.4065 | MAVLVLLSFLSIIIIFIVHKFITYSARASLPPGPLGLPLIGNIHQLDASSPHSSLWKLSKRYGPLMSLRLGCVPCLVVSSAKMAKEVLKTHDLKFASRPPFLGLRKFSYNGLRQIKKLCIIHLFSSKRVQSFRPIRENEVAQMIHKVSKYDASGKAVNLTETLMSFNSSLICRIAFGKKYGCDYEEEAGLGSGQRKSRMHMLLNEAEALFTEFYFSDYFPLIAWVDRLRGTLWKLDKAFKELDMIYEQVIQDHMDLTRPKTSDKEVADIIDIFLEIMNNHSLSFDLTIDHIKAVLMNIFIAGTDTSSALVVWAMTSLLKNRRVMNKVYGEIRDLFGDKDFISEDEIEKLHYFKAMVKEALRLFPPAPLLLPRETIESCNIDGYEIPARTLVHVNAWAIARDPEIWEDPEEFYPERFLGSSIDFKGRDFGFIPFGSGRRICPAMNMGVATIELSLANLLHSFDWDVPPGIHKEEMLDTQVIPGLTMHKKIDLNLIVRKRST* | 501 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja5g3302 | 500 | Gene3D | Cytochrome P450 | 24 | 500 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Lja5g3302 | 500 | PRINTS | P450 superfamily signature | 354 | 365 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Lja5g3302 | 500 | PRINTS | P450 superfamily signature | 301 | 318 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Lja5g3302 | 500 | PRINTS | P450 superfamily signature | 431 | 440 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Lja5g3302 | 500 | PRINTS | E-class P450 group I signature | 83 | 104 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Lja5g3302 | 500 | PRINTS | E-class P450 group I signature | 290 | 307 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Lja5g3302 | 500 | PRINTS | E-class P450 group I signature | 59 | 78 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Lja5g3302 | 500 | PRINTS | E-class P450 group I signature | 353 | 371 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Lja5g3302 | 500 | PRINTS | E-class P450 group I signature | 310 | 336 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Lja5g3302 | 500 | PRINTS | E-class P450 group I signature | 430 | 440 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Lja5g3302 | 500 | PRINTS | E-class P450 group I signature | 166 | 184 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Lja5g3302 | 500 | PRINTS | E-class P450 group I signature | 394 | 418 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Lja5g3302 | 500 | PRINTS | E-class P450 group I signature | 440 | 463 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Lja5g3302 | 500 | SUPERFAMILY | Cytochrome P450 | 31 | 498 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Lja5g3302 | 500 | PANTHER | CYTOCHROME P450 71B11-RELATED | 8 | 496 | - | - | |
| Lja5g3302 | 500 | Pfam | Cytochrome P450 | 31 | 487 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Lja5g3302 | 500 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 433 | 442 | IPR017972 | GO:0005506|GO:0016705 | |
| Lja5g3302 | 500 | PANTHER | CYTOCHROME P450 83B1 | 8 | 496 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lja5g3302 | Lja-Chr5 | 63964391 | 63967179 | Tandem |
Event-related genes