Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3294 ATGGAGGGGGAAGAGATTAGGTCTGGGACCAAGAAGAAGAGATCCAAGCCTCTTGAAATTGGTTTTGATTCCGATGACGACGAGCCGATTGGGTCCTTGTTCAAGCTCAAGAGGTCCAGGAAGAAGGTTAGTTTGGCATGTGGAGGTGCTGATTCTGTTAAGGAAGGTGAAGATTTAGGGTGTATGGATGATACCTTGGCTAGTTTCAGGAAGAGGTTGAAGGGTCCTAAGAGAGATCAGGGATCTGAACCCACACCCACACCCGCACCCGCATCTGCTTTGAATGTTTCTCGCGAGGGTCATGATGATGAGGGTTTGGTTTCTGGGGGATCCAGGGATGGCAAGCAGCTGCAGCATTCTTCTGATCAGGATAAGGAAGGTTCCTTGTCTGAGATTTTCCATAAGGCGGGACAATCTAATTCGATTAGGAAAACCCGTGTTTCGTCAGGTTCTACAAAGCAGAAAAGAGGGGTTCAGAATGTGGATAGTGGGTTGAGCACGTGCTCGGAAGGTTTTACAGAAACTGTGGATTCTGTGGTTGAAAGTAGATCTAGATCTTCTTCTGCCTTGAAATTAGGTAAGAGGAATGTGAAGTCTGCTCCGTTTTCTTCAGTACCTGCGGTGGATGATCAAAAGGGTGTTGATGACTGTTTTCAAGAGGAATCTGCCCAGAGAACATGCAATTCAGACATTCCAGATGTACCATTAGTTGATCACTCTCAGTCTATCAATGTCTGTGATGGAGATAGGCAACAAGTGTCTGGTATACAAGTTGAAGATATTTGTTGCGCTTCTGACCAAAAGGCTGCATTGCAAGAAAGAGTTTGTAATGATGGTTTGAATCATTGTTCTGCTGTGGTAGAGGATCTTGAAGTAATTGGTACTGCATCTCCATCTAAAGTGGCGGAAGGGGCATGTGGATTTACTGAGGCTGGAGAGCTTGAGAATAGGTTGACTGATGAAATAGCAGAAGTGTATAATGGTGCTTCAGAATGTGGTGCTGTTTGTACTTCTACCGTGAAAGAAGATTTCGTAACTCGTCACAATGAGCCCTTGATTGAAGCAACTGAAAAACCGGAAACTGAGTTTGTACCTAGTAGTTTGGATGCAAATGCTGAATTGCAAAAACATGAAGCAACTGCCAGTCGTAATCTATCTTCAGTGGTGCCTAATGAAGCCAATGAATCTGAAATGGCTGTCCAGTCAAATAACCCAGAGGAACCTTTAGTAACGTGCAATATTCCAAAATACTCTACCGCTTCAATTCCAAAATGCAGCTCAGTCTTAGATCCAATTCAATCTGATGGATCCTCGATTCAATCTTCAATCCCAGATGAAAATGGAAAAACTGCAGAATTTCACGCCCCTGTGTCTGATTTCGCTGATGATGATGGTAAGACATCAGGCATTCCTCGTGTGATGAGAAAGGCCAAAGTTCGTAAGCATGAAGACATGACTTATGAGGGGGATGCTGATTGGGAGATTCTAATGAATGATAGAGCTCAAAATGAAAGCCAAGTTGTTGGCGATGGTGAACACACTCTTAGAACTAGATTGAAGCATAATTCCTCTTTGAATGCTGTTGAAGACTCTGAAAATGTTGCAGCAGTAGCAGTATCTGCTGGATTGAAAGCCCGTGCAATCAGTCCAATTGAGAAAATAAAATTTAAGGAGATCTTGAAACGCAAAGGTGGTCTCAAGGAATATTTGGATTGCAGGAATCAGATCTTAAGTCTATGGAGCAGAGATGTCACGCGTATTTTGCCTCTTGCTGACTGTGGAGTTTGTGATATTCGTTCTGAGGATGAAAGTCCTCGATCTTCTCTTATTAGAGAGGTCTATGCCTTTCTCGATCAATATGGTTATATAAATGTTGGAATTGCCTCTCATAAGGAGAACGTTGGAAATAGTGCAAGGTATAAACTTCTAAAAGAAAAAGGTTTTGAAGAAAGTTCCACAGCTTCATTGGCTGACTCGGAAGATGGAGTTTCCTTTATTGTTGGTCAAACTAAAATGTCAGAGACTATTGTGGAGATTAATGATGGTCTTACAAAGGCTTATGAAGACCTGACAATTGAAGCGACAGAAGGCACAAAGCATGTTTGTGAAGCAATGATGGATTTATCAAATGTGACGCACCATGATGAAAGAAAAAAAATTGATTACCAAGAAAATGTTGGGATTCCAGACGGAGTTAGTGGAACTGTACATGTCAATATTAACAGTTCTGTTTCTCCATCCAAGTTTCCTGATTGCAGATTGGCTTCTCTTGCGGCTACAGAGCAAAGCAATGAATCTACCTGTGTTAAATCTTACTTAGGTGATCAGATAGGTGATCGTCTGCAGTCTGAAATAGATGTTAGAAAGAGAGTGATTGTGATTGGAGCTGGCCCAGCTGGGCTAACTGCTGCTCGCCACTTACAACGTCAGGGATTTCCTGTAACTGTACTTGAGGCTAGGAATAGGATAGGGGGTCGTGTATTTACCGATCGCTCATCTCTTTCTGTCCCTGTGGATCTTGGTGCTAGCATTATCACTGGTGTTGAGGCTGATGTGGCCACTGAGAGAAGACCAGATCCTTCCTCATTGGTTTGTGCTCAGCTGGGCCTTGAGTTGACAGTATTAAACAGTGACTGCCCTCTTCATGACATAGTGACAGGACAAAAAGTTCCCGCAGATATGGATGAAGCATTGGAAGCTGAATACAATAGTCTTCTTGATGACATGGTACTTGTTGTAGCTCAGAAAGGTGAGCAAGCAATGAGAATGTCTCTTGAAGATGGTTTAGAATATGTCCTTAAGATTCGCCGTACAGGACACTCTGAAAGTAGTGAAGAAACTAAACAAAATGTTTCAGCAGATAGTCCATTTGATTCCAAAAAGAAGGATGCCATGGAACAAAAATTCGATGAGGAGATTTTGAGTCCTCAGGAGAGGAGGGTTATGGATTGGCACTATGCTCATTTAGAGTATGGTTGTGCTGCTTTGCTTGAGGAAGTTTCTCTTCCCTACTGGAATCAAGATGATGTGTATGGAGGATTTGGGGGAGCTCATTGTATGATTAAAGGAGGTTACAGTACTGTAGTTGAGTCTCTAGGAGAAGGGCTTGCTATTCACTTGAACCATGTTGTAACTAATGTGTCATATGGTATCAAGGAACCTGGCCATAATAATAAAGTGAAAGTTTCTACATCAAATGGCAATGAATTTTTTGGAGATGCTGTCCTCATTACTGTTCCACTTGGTTGTATGAAGGCTGAAACTATACAATTCTCCCCCCCTTTACCACCGTGGAAATGTTCTTCTATTCAGCGTCTTGGTTTTGGAGTTCTCAATAAAGTGGTTTTGGAATTTCCTACTGTGTTTTGGGATGATGCTGTAGACTACTTTGGAGCAACAGCTGAGGAGAGAAGCAGAAGAGGTCACTGTTTTATGTTCTGGAATGTCAGGAAAACTGCTGGGGCTCCTGTCCTTATAGCATTAGTGGTTGGTAAGGCAGCCAGAGATAGTCATAGTTTAAGCTCTTCTGATCACGTCAACCATGCATTGAAGGTTCTCCGTAAACTTTTTGGGGAGGGTTCAGTTCCTGATCCTGTTGCATATGTTGTGACTGATTGGGGTAGGGATCCTTATAGCTTTGGTGCTTACTCTTATGTTGCTGTTGGAGCATCAGGAGAAGACTATGATATAATAGGAAGGCCAGTGGATAACAGCTTGTTTTTTGCTGGTGAAGCAACCTGCAAGGAGCACCCTGATACTGTTGGTGGTGCGATGATGAGTGGACTGCGGGAGGCTGTTCGCATAATTGACATATTGAACACTGGAAATGATTTTACTGCCGAGGTGGAGGCACTGGAAGCTGCACGGGAACAGTTAGACCCTGAAAGGGATGAAGTTAGGGACATAATAAAGAGACTTAATGCAGTTGAGCTTTCTAACATAATGTACAAGAACTCTTTAGATGGTGCTCAAATCCTAACGCGGGAAGCTTTATTAAGGGAAATGTTCCTCAATGTGAAAACCAATGCCGGGCGCTTGCATGTGGCCAAACAATTGCTAAGTCTTCCTATTGGAAACTTGAAGTCCTTTGCTGGAAGTAAAGAGGGGCTAACCATTCTGAACTCATGGATACTGGACTCATTGGGGAAGGATGCTACCCAACTCTTGAGACACTGTTTGCGAATTCTTGTGCGCGTGTCAACGGATCTAGTTGCTGTTCGCTTATCAGGAATGGGGAAAACCGTGAAGGAAAAAGTTTGTGTACATACTAGCCGTGACATTCGTGCTATAGCAAGCCAGTTGGTCAATGTATGGCTTGAAGTTTTCCGCAAGGGAAAAGGTTCTAATGGGGGGTTAAAGTTGTCGAGGCAAGCATGTACTGTAGATTTATCAAAGAGAAAATCTATAAAAGATTCAGCCTCAGGAAAGCCTCCCATGGGCACACATCAGGGTATCGTTGAGAATAAAGGAAGCTTGCTAAATCCTGTGTCTGCTGGAAGTAATTCACCTTCCACCACACACATGAAGAAGTTACAAAGCAAACAAGCAAAACAACCAGCAGCATATGACTCAAGGCACGAGGTCAGTTCTTCCAGGTCTCTAGGTTCAATAGACAAAGTTGTTTCTGAGAAGGAAGATAACCACTATGTTATTTCTGAAGAAGAAAAGGCTGCTGTTGCTGCTGCAGAAGCTGCCCGTGCTAAAGCACTTGCTGCTGCAGAGGCATATGCCTCTGCAGAAGCCAGGTGCAATAAGCTGTTGCAGCTTCCAAAGATACCTTCATTCCACAAATTTGCTAGACGGGAGCAATATCCACCAAATGATGAGTGTGATAGTAGACAGAAGTGGTCTGGTGGTGTTTCTGGAAGGCAAGATTGTTTTTCAGAGATTGATTCTAGGAATTGCAGAGTTAGGGACTGGTCTGTTGATTTCTCTGCTGCTTGTGTTAACCTTGATAATACCAGAATGCCTGTTGATAACCTTTCACTGAGGAGTCATTCAAATGAGATTGCCAGCCATTTGAATTTCAGAGAGCACTCAGGAGAAAGTGCTGCTGTCGACAGCAATATATATACAAAAGCTTGGATTGACACAGATGGTGGCGAGGGAATAAAAGACCATCATGCCATTGAGAGATGGCAGTCTCAAGCAGCAGCAGCTGATTCTTATTTTTCGAATCCAACCATTCACTTGAAGGATGAAGAGGATTCAAATACCTATTCAAGGTTAACTAGCTGGCCTGATGGTATGGCAAATGAGAGCTCTATTTCACAGGTTACTGTAAATAAGGAGGCCTTAAAAGGTCATTCTCGAGGGGCAGATCATATTAAACAGGCTGTTGTCGACTATGTTGCATCGCTTCTTATGCCCCTTTATAAGGCAAGGAAACTAGACAAGGATGGATACAAGGCTATCATGAAGAAAAGTGCAACAAAGGTCATGGAGCAAGCAACAGATTCAGAAAAATCGATGACCGTTTTTGAGTTTCTAGATTTCAAGCGAAAAAATAAGATTCGCTCCTTTGTGGATCTATTAATTGAGAGACATATGGCTTCGAGACCAGACAAGAAGTCTTAA 5577 0.4282 MEGEEIRSGTKKKRSKPLEIGFDSDDDEPIGSLFKLKRSRKKVSLACGGADSVKEGEDLGCMDDTLASFRKRLKGPKRDQGSEPTPTPAPASALNVSREGHDDEGLVSGGSRDGKQLQHSSDQDKEGSLSEIFHKAGQSNSIRKTRVSSGSTKQKRGVQNVDSGLSTCSEGFTETVDSVVESRSRSSSALKLGKRNVKSAPFSSVPAVDDQKGVDDCFQEESAQRTCNSDIPDVPLVDHSQSINVCDGDRQQVSGIQVEDICCASDQKAALQERVCNDGLNHCSAVVEDLEVIGTASPSKVAEGACGFTEAGELENRLTDEIAEVYNGASECGAVCTSTVKEDFVTRHNEPLIEATEKPETEFVPSSLDANAELQKHEATASRNLSSVVPNEANESEMAVQSNNPEEPLVTCNIPKYSTASIPKCSSVLDPIQSDGSSIQSSIPDENGKTAEFHAPVSDFADDDGKTSGIPRVMRKAKVRKHEDMTYEGDADWEILMNDRAQNESQVVGDGEHTLRTRLKHNSSLNAVEDSENVAAVAVSAGLKARAISPIEKIKFKEILKRKGGLKEYLDCRNQILSLWSRDVTRILPLADCGVCDIRSEDESPRSSLIREVYAFLDQYGYINVGIASHKENVGNSARYKLLKEKGFEESSTASLADSEDGVSFIVGQTKMSETIVEINDGLTKAYEDLTIEATEGTKHVCEAMMDLSNVTHHDERKKIDYQENVGIPDGVSGTVHVNINSSVSPSKFPDCRLASLAATEQSNESTCVKSYLGDQIGDRLQSEIDVRKRVIVIGAGPAGLTAARHLQRQGFPVTVLEARNRIGGRVFTDRSSLSVPVDLGASIITGVEADVATERRPDPSSLVCAQLGLELTVLNSDCPLHDIVTGQKVPADMDEALEAEYNSLLDDMVLVVAQKGEQAMRMSLEDGLEYVLKIRRTGHSESSEETKQNVSADSPFDSKKKDAMEQKFDEEILSPQERRVMDWHYAHLEYGCAALLEEVSLPYWNQDDVYGGFGGAHCMIKGGYSTVVESLGEGLAIHLNHVVTNVSYGIKEPGHNNKVKVSTSNGNEFFGDAVLITVPLGCMKAETIQFSPPLPPWKCSSIQRLGFGVLNKVVLEFPTVFWDDAVDYFGATAEERSRRGHCFMFWNVRKTAGAPVLIALVVGKAARDSHSLSSSDHVNHALKVLRKLFGEGSVPDPVAYVVTDWGRDPYSFGAYSYVAVGASGEDYDIIGRPVDNSLFFAGEATCKEHPDTVGGAMMSGLREAVRIIDILNTGNDFTAEVEALEAAREQLDPERDEVRDIIKRLNAVELSNIMYKNSLDGAQILTREALLREMFLNVKTNAGRLHVAKQLLSLPIGNLKSFAGSKEGLTILNSWILDSLGKDATQLLRHCLRILVRVSTDLVAVRLSGMGKTVKEKVCVHTSRDIRAIASQLVNVWLEVFRKGKGSNGGLKLSRQACTVDLSKRKSIKDSASGKPPMGTHQGIVENKGSLLNPVSAGSNSPSTTHMKKLQSKQAKQPAAYDSRHEVSSSRSLGSIDKVVSEKEDNHYVISEEEKAAVAAAEAARAKALAAAEAYASAEARCNKLLQLPKIPSFHKFARREQYPPNDECDSRQKWSGGVSGRQDCFSEIDSRNCRVRDWSVDFSAACVNLDNTRMPVDNLSLRSHSNEIASHLNFREHSGESAAVDSNIYTKAWIDTDGGEGIKDHHAIERWQSQAAAADSYFSNPTIHLKDEEDSNTYSRLTSWPDGMANESSISQVTVNKEALKGHSRGADHIKQAVVDYVASLLMPLYKARKLDKDGYKAIMKKSATKVMEQATDSEKSMTVFEFLDFKRKNKIRSFVDLLIERHMASRPDKKS* 1859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3294 1858 MobiDBLite consensus disorder prediction 117 131 - -
Lja5g3294 1858 MobiDBLite consensus disorder prediction 1466 1535 - -
Lja5g3294 1858 ProSiteProfiles SWIRM domain profile. 534 634 IPR007526 GO:0005515
Lja5g3294 1858 MobiDBLite consensus disorder prediction 133 167 - -
Lja5g3294 1858 PRINTS Adrenodoxin reductase family signature 790 812 - -
Lja5g3294 1858 PRINTS Adrenodoxin reductase family signature 813 826 - -
Lja5g3294 1858 MobiDBLite consensus disorder prediction 940 960 - -
Lja5g3294 1858 PANTHER FLAVIN MONOAMINE OXIDASE 461 1854 - -
Lja5g3294 1858 SUPERFAMILY FAD-linked reductases, C-terminal domain 1107 1218 - -
Lja5g3294 1858 Pfam SWIRM domain 544 624 IPR007526 GO:0005515
Lja5g3294 1858 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 461 1854 - -
Lja5g3294 1858 Pfam Flavin containing amine oxidoreductase 799 1269 IPR002937 GO:0016491
Lja5g3294 1858 MobiDBLite consensus disorder prediction 1487 1535 - -
Lja5g3294 1858 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1367 1450 IPR035441 -
Lja5g3294 1858 SUPERFAMILY FAD/NAD(P)-binding domain 788 1272 IPR036188 -
Lja5g3294 1858 SUPERFAMILY Homeodomain-like 533 629 IPR009057 -
Lja5g3294 1858 MobiDBLite consensus disorder prediction 1 31 - -
Lja5g3294 1858 MobiDBLite consensus disorder prediction 70 167 - -
Lja5g3294 1858 Gene3D - 897 1224 - -
Lja5g3294 1858 Gene3D - 791 1267 IPR036188 -
Lja5g3294 1858 Gene3D - 533 637 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3294 Lja-Chr5 63887669 63900621 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Lja5g3294 Amino_oxidase 5.3e-109 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3294 5 63887669 63900621 Lja5g3294 5 63887669 63900621 ECH