Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3292 ATGAACGCAATTCGGTCGCGTTGGTTGGCGACAATGGCAGAAAACATTGGCAAAACCAATCTCCAAACCTCTGCTTCTTCTGCAACAACAACATCTTCCTCGCTTCGTCGTTTCTTGCCTTCTGTCCTGCGTTGGATCCCAACTTCCACCGACCACATCATCAACGCCGAGAAGCGCCTCCTCTCTCTTGTCAAGACTCCGTATGTTCAGGAACAAGTTAATATAGGTTCTGGACCACCAGATTCTAGAGTTAGGTGGTTCCGTTCCTCGAGCAACGAGCCACGGTTTATCAACACCGTCACGTTTCAAAGTAAAGATGACGCTCCTACGTTGGTGATGGTTCATGGATATGCCGCGTCACAGGGTTTCTTTTTCCGCAACTTTGATGCTCTTGCCTCTCGTTTCAGAGTCATTGCTATTGATCAACTTGGTTGGGGTGGATCTAGCAGGCCTGATTTTACATGCAAAAGCACTGAAGAAACTGAGGCGTGGTTCATTGATTCCTTTGAGGAATGGAGAAAAGCCAAAAACCTGAGCAATTTTATACTGGTTGGGCATTCTTTTGGGGGTTATGTTGCTTCCAAATATGCACTTAAGCACCCAGAGCATGTACAACACTTGGTTCTGGTGGGATCTGCTGGATTTTCATCAGAAACAGAGAGGATTACTAAGTTCTTATCGACTTGGAAGGGATCAATCCTGAAGCAAATATGGGATTCTAATTTCACACCTATGAAAATTATCAGAGGATTAGGTCCTTGGGGTCCTGATTTGGTCCGCAGGTATACAAGTGCTAGATTTTCAACTGGGGAAATGCTGACAGAATCTGAATCGACATTGCTGACAGATTATCTTTACCACACAACAGCTGCCAAACCTAGTGGCGAGCTGTGCTTAAACTATATATTTTCATTTGGAGCATTCACCAAGTTGCCCCTTCTTCAAAGTGCCTCAGAGTGGAAGGTGCCCACTACTTTCATATATGGTGTCCAAGACTGGATGAATTATGAAGGGGCTCAAGAAGCTCGCAAGCATATGAAAGTTCCCTGTGAAATCATTAGGGTTCCCCAGGCCGGGCATTTTGTGTTCATCGAAAACCCGTCTGGCTTCCATTCAGCTGTGTTTCATGCTTGCCGGAGGTTTCTGAGTCCTGATCCTGACAATGAACCCCTTCCTGAAGGGCTAATCTCTGCATAG 1197 0.4578 MNAIRSRWLATMAENIGKTNLQTSASSATTTSSSLRRFLPSVLRWIPTSTDHIINAEKRLLSLVKTPYVQEQVNIGSGPPDSRVRWFRSSSNEPRFINTVTFQSKDDAPTLVMVHGYAASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILVGHSFGGYVASKYALKHPEHVQHLVLVGSAGFSSETERITKFLSTWKGSILKQIWDSNFTPMKIIRGLGPWGPDLVRRYTSARFSTGEMLTESESTLLTDYLYHTTAAKPSGELCLNYIFSFGAFTKLPLLQSASEWKVPTTFIYGVQDWMNYEGAQEARKHMKVPCEIIRVPQAGHFVFIENPSGFHSAVFHACRRFLSPDPDNEPLPEGLISA* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3292 398 PRINTS Alpha/beta hydrolase fold signature 183 196 IPR000073 -
Lja5g3292 398 PRINTS Alpha/beta hydrolase fold signature 134 149 IPR000073 -
Lja5g3292 398 PRINTS Alpha/beta hydrolase fold signature 197 210 IPR000073 -
Lja5g3292 398 Gene3D alpha/beta hydrolase 95 382 IPR029058 -
Lja5g3292 398 Pfam alpha/beta hydrolase fold 109 367 IPR000073 -
Lja5g3292 398 PANTHER RE40534P-RELATED 12 391 - -
Lja5g3292 398 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN-RELATED 12 391 - -
Lja5g3292 398 SUPERFAMILY alpha/beta-Hydrolases 98 374 IPR029058 -
Lja5g3292 398 PRINTS Epoxide hydrolase signature 322 338 IPR000639 GO:0003824
Lja5g3292 398 PRINTS Epoxide hydrolase signature 355 377 IPR000639 GO:0003824
Lja5g3292 398 PRINTS Epoxide hydrolase signature 134 149 IPR000639 GO:0003824
Lja5g3292 398 PRINTS Epoxide hydrolase signature 183 196 IPR000639 GO:0003824
Lja5g3292 398 PRINTS Epoxide hydrolase signature 197 210 IPR000639 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3292 Lja-Chr5 63430408 63434850 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3292 5 63430408 63434850 Lja5g3292 5 63430408 63434850 ECH
Lja5g3292 5 63430408 63434850 Lja1g3532 1 44013103 44017824 PCT