Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3283 ATGGTATCTCTGACTTCTCCACCCTCATTCTGCAGAATCCAATTACAGGAAACTCGCTTCTTCTCCACTCCATTGCTTCCACCATGTAGCAGAATCGAATTCCCAAACCCTAAATGCAAAACTGTGGTGGTAGAATGCAGGGTCACGAGCGCCAACAACGCTTCTCCACCGTCCACAGCGTTGGCGAAGGAGCCTCACAAGTATTTCGACCACGCAGTCATCACCGTTCGCGGCGGAGACGGTGGACACGGCGCGGTGCTGAACCAGAAGGTGAAAGAGGAGAAGGAGACGAAGAATTGGAAGAAGAGTTCTTTCAAGAGGGACTTTGACGGTTCCATCGTGCTCCCTTTGGGTGGCCATGGAGGGGATGTGCTTGTGTACGCGGATGAGTCGAAGGATACGTTGCTGGAGTTTCACAACAAGGGTCGGTTTAACGCGAAGCGTGGTGGCAATGTTGATGCAATGGGACTCTTGACCTCGCACTTGCGTGATGGACTTGCTGCTCCTACTCTGCGTATCGCTGTTCCTCTAGGTACAGTTGTGAAAAGCAAACGGGGGAAGACATTAGCTGATCTAGCACAACCTGGTGATGAAGTTATTGTTGCAAGGGGTGGACAAGGAGGGATTAGCTTGTTAGAAATGCCACAGAATAAAAGGAAAAAGATGATGGCTTTGACAACTAATGTGATGCGAGATGAATCTGATAAGGTTTTGGTTCACGGTCAACCTGGGGAGGAAGTTAAGTTGGAGTTGATCCTACGAGTTGTTGCAGACGTTGGTCTAATTGGACTTCCAAATGCTGGGAAATCAACACTTCTGGCAGCCATTACACTTGCAAAACCTGATATTGCTGATTATCCTTTTACAACTTTAATGCCTAATCTTGGACGCCTTGGTGGTGATCCCAGTTTGGGGGCCGGTATGTATTCTTCTGAGGCTACATTGGCAGATTTGCCTGGACTTATAGAAGGTGCTCACTTGGGAAAGGGTCTTGGCCGCAATTTTTTGAGGCACCTAAGGAGGACCCGACTGTTGGTCCATGTTGTTGACGCAGCCACCGAGGACCCTATAAATGATTACAGAACTGTCAGAGAAGAGTTGCGCATGTATAATCCTGAGTACCTTGAACGACCGTACATTGTTGTTTTAAATAAGATTGACCTACCAGAGGTAAAGGACAGGCTTCCATTGTTGACCCGAGAAATTCTGAGAATCGGCAACGATGGTGCAGCTTCTGAACAGAAAGAACAGTCTGAAGTTGCAGCTCAATTGTTGTCCGATGAAAGTGACAAGAAGGAAAGAACACTTGAGGACTATCCACTTCCTCTCTCTGTTGTTGGAGTTAGTGTTCTAAAGGGTATCAGGATTAAGGAGATGTTAAAGGAGATAAGGGCGGCTTTAAGGAAGTGCAAAGATTCTAATGAAGCATAG 1431 0.4724 MVSLTSPPSFCRIQLQETRFFSTPLLPPCSRIEFPNPKCKTVVVECRVTSANNASPPSTALAKEPHKYFDHAVITVRGGDGGHGAVLNQKVKEEKETKNWKKSSFKRDFDGSIVLPLGGHGGDVLVYADESKDTLLEFHNKGRFNAKRGGNVDAMGLLTSHLRDGLAAPTLRIAVPLGTVVKSKRGKTLADLAQPGDEVIVARGGQGGISLLEMPQNKRKKMMALTTNVMRDESDKVLVHGQPGEEVKLELILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAATEDPINDYRTVREELRMYNPEYLERPYIVVLNKIDLPEVKDRLPLLTREILRIGNDGAASEQKEQSEVAAQLLSDESDKKERTLEDYPLPLSVVGVSVLKGIRIKEMLKEIRAALRKCKDSNEA* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3283 476 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 257 468 IPR031167 GO:0005525
Lja5g3283 476 SUPERFAMILY Obg GTP-binding protein N-terminal domain 68 224 IPR036726 -
Lja5g3283 476 Gene3D GTP1/OBG domain 67 255 IPR036726 -
Lja5g3283 476 ProSitePatterns GTP1/OBG family signature. 317 330 IPR006074 GO:0005525
Lja5g3283 476 PRINTS GTP1/OBG GTP-binding protein family signature 315 330 IPR006073 GO:0005525
Lja5g3283 476 PRINTS GTP1/OBG GTP-binding protein family signature 259 279 IPR006073 GO:0005525
Lja5g3283 476 PRINTS GTP1/OBG GTP-binding protein family signature 332 350 IPR006073 GO:0005525
Lja5g3283 476 PRINTS GTP1/OBG GTP-binding protein family signature 280 298 IPR006073 GO:0005525
Lja5g3283 476 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 42 475 IPR045086 GO:0003924|GO:0005525
Lja5g3283 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 258 467 IPR027417 -
Lja5g3283 476 ProSiteProfiles Obg domain profile. 66 256 IPR006169 -
Lja5g3283 476 CDD Obg 257 398 IPR031167 GO:0005525
Lja5g3283 476 Gene3D - 256 475 IPR027417 -
Lja5g3283 476 PANTHER GTP-BINDING PROTEIN OBGC2-RELATED 42 475 - -
Lja5g3283 476 Pfam GTP1/OBG 70 254 IPR006169 -
Lja5g3283 476 Coils Coil 456 476 - -
Lja5g3283 476 Pfam 50S ribosome-binding GTPase 258 385 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3283 Lja-Chr5 63285101 63291059 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3283 5 63285101 63291059 Lja5g3283 5 63285101 63291059 ECH