Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3282 ATGGAACCTGATCCTCGTCAATACGAGAAGATCGCTATTAATGAAAAAGACATCCCCAATATTGTTCTGTCATATCTTATACATAATTGCTATGAAGAGTCAGTGGAATCATTCATTTCATGCACTGGGATTAAGAAGCCTGCAGATTATTTGGAAAACATGGAGAAAAGAAAAAAAATCTTTCACTATGCACTGGAGAGAAATGCACTTAAGGCTATTGAGCTAACAGAACAGCTGGCAAAGGATATTCTAGAAAACAATAAGGATTTGCTGTTTGATCTTCTAAGCCTTCATTTTGTAGAGCTTGTCCGCTCTAGGAAATGCACAGAAGCTTTGGAATTTGCTCAGACCAAGTTGAGCCCTTTTGGAAAGGAGCAAAAATATATGCAAAACCTTGAAGATTTTATGGCCCTTCTTGCTTATCAGGAGCCAGAGAAATCCCCAGTGTTTCATTTGCTTAGCCCAGAGTATCGTCAACAGGTTGCAGATAGATTGAATCGAGCTATTCTTGCATACTTTAACCTTCCCAGCCACACAGCAATGGAGAGGCTGATACAGCAGACGACAGTAGTTAGACAGTGCTTAAGTCAGGAGGCTGGAAAGGATGGGCACCAGCCATTTTCCTTGAAGGATTTTCTTAAGAGAAGATGA 651 0.404 MEPDPRQYEKIAINEKDIPNIVLSYLIHNCYEESVESFISCTGIKKPADYLENMEKRKKIFHYALERNALKAIELTEQLAKDILENNKDLLFDLLSLHFVELVRSRKCTEALEFAQTKLSPFGKEQKYMQNLEDFMALLAYQEPEKSPVFHLLSPEYRQQVADRLNRAILAYFNLPSHTAMERLIQQTTVVRQCLSQEAGKDGHQPFSLKDFLKRR* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3282 216 PANTHER RAN BINDING PROTEIN 9-RELATED 12 214 - -
Lja5g3282 216 ProSiteProfiles LIS1 homology (LisH) motif profile. 14 46 IPR006594 GO:0005515
Lja5g3282 216 SMART ctlh 53 110 IPR006595 -
Lja5g3282 216 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 53 110 IPR006595 -
Lja5g3282 216 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 30 12 214 - -
Lja5g3282 216 SMART toby_final6 106 201 IPR013144 -
Lja5g3282 216 Pfam CTLH/CRA C-terminal to LisH motif domain 54 192 IPR024964 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3282 5 63280071 63283725 Lja5g3282 5 63280071 63283725 ECH