Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3281 ATGGCGGCGGAAGAGGGAACGGTCATCGGCGTCCACACCGTCGAAGCATGGAAGGAGCATCTCGAGAAGGGAAACGTCTCCAAGAAACTCATTGTGGTTGACTTTACTGCTTCCTGGTGTGGTCCTTGCCGTTTCATTGCACCAATTCTGGCTGAGATTGCTAAGAAGTTACCACATGTTGTCTTCCTCAAGGTGGATGTGGATGAGTTGAAGACTGTTGCTGAGGAATGGAATGTTGAGGCCATGCCAACCTTCCTCTTCTTGAAAGAAGGCAAGGCAGTGGACAAGGTTGTGGGTGCTAAGAAGGAAGAGCTGCAACTCACAATAACCAAGCATGCTGAAGCTCCTGGAACTTCTACTGCTTGA 366 0.4973 MAAEEGTVIGVHTVEAWKEHLEKGNVSKKLIVVDFTASWCGPCRFIAPILAEIAKKLPHVVFLKVDVDELKTVAEEWNVEAMPTFLFLKEGKAVDKVVGAKKEELQLTITKHAEAPGTSTA* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3281 121 SUPERFAMILY Thioredoxin-like 5 114 IPR036249 -
Lja5g3281 121 CDD TRX_family 15 104 - -
Lja5g3281 121 ProSiteProfiles Thioredoxin domain profile. 1 114 IPR013766 -
Lja5g3281 121 ProSitePatterns Thioredoxin family active site. 32 50 IPR017937 -
Lja5g3281 121 PRINTS Thioredoxin family signature 78 89 - -
Lja5g3281 121 PRINTS Thioredoxin family signature 31 39 - -
Lja5g3281 121 PRINTS Thioredoxin family signature 39 48 - -
Lja5g3281 121 PANTHER THIOREDOXIN 3 115 - -
Lja5g3281 121 Pfam Thioredoxin 11 110 IPR013766 -
Lja5g3281 121 Gene3D Glutaredoxin 1 118 - -
Lja5g3281 121 PANTHER THIOREDOXIN 3 115 - -
Lja5g3281 121 TIGRFAM thioredoxin: thioredoxin 26 111 IPR005746 GO:0015035
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3281 Lja-Chr5 63268431 63270324 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3281 5 63268431 63270324 Lja5g3281 5 63268431 63270324 ECH