Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3280 ATGGAAACCACCTCAGTTTCCAAGCTTCTCACACTGTTCTTCTTCACAGTCTTGTTCGTGTGTTCTGAGCTGATCCACTGCAGTGTCACCTACGACAAGAAAGCCATTGTCATCAATGGCCAAAGAAGGATCCTCATCTCTGGCTCCATTCACTACCCCAGAAGCACCCCTGAAATGTGGGAGGATCTGATTCAGAAAGCCAAACATGGAGGCCTAGATGTCATAGACACTTATGTCTTCTGGAATGTTCATGAACCATCTCCTGGCAATTACAACTTTGAAGGAAGATACGATTTGGTACGGTTCATTAAGACAGTGCAGAAAGTGGGGCTCTATGTACATCTTCGAATTGGACCATATGTTTGTGCTGAGTGGAACTTTGGAGGATTTCCTGTTTGGTTGAAGTATGTTCCTGGCATCAGTTTCAGAACAGATAATGGCCCTTTCAAGGCAGCAATGCAAGGCTTCACTCAAAAAATTGTCCAGATGATGAAGAATGAAAAGCTATTTCAATCTCAGGGTGGTCCAATCATTCTTGCTCAAATTGAGAATGAGTTCAAGCTACTAGGCAAGGGAAGGGCACTGGCACCTGCTGATTATAAATACATAAACTGGGCTGCAAAGATGGCTGTTGGATTGGGTACGGGAGTCCCCTGGGTGATGTGCAAGGAAGATGATGCCCCAGATCCAGTGATAAATGCATGTAATGGTTTTTACTGTGATGATTTCTCTCCAAATAAACCATACAAACCAAAACTTTGGACTGAAGCTTGGAGTGGCTGGTTTACAGAATTTGGTGGCCCAATTTATCAGCGACCAGTTGAGGATCTAGCATTTGCAGTTGCTCGTTTCATACAAAAGGGTGGCTCATATTTCAATTATTACATGTATCATGGAGGAACAAATTTTGGAAGATCAGCAGGAGGCCCATTCGTTACTACAAGCTATGACTATGATGCACCAATTGATGAATACGGTTTGCTCAGAGAACCTAAATATGGTCACTTGAAGGACCTTCACAAAGCTATTAAACAATGTGAACATGCTTTGGTTTCTTCAGATCCTACTGTTACATCCTTAGGTACCTATGAGCAGGCTTATGTATTCTCCTCAGGAACCGGAACATGCGCAGCTTTTCTAGCAAACTTCCATTCAAACTCTGCTGCAAGAGTGACCTTCAAAAACAAGCACTATGACTTGCCTCCTTGGTCCATAAGCATCCTCCCAGATTGCAAAACAGATGTATTTAACACCGCAAGAGTGAGGTTTCAAGCTTCACAGATACAAATGCTTCCTAGCAATTCTAGGTTGTTCTCATGGGAGACCTATGATGAAGATATAACTTCTCTAGAGGAAAGTTCAAGGATTACAGCTTCAGGACTTATAGACCAGATAAACGCTACCAGAGACACTAGTGATTATCTGTGGTACATAACTAGTGTTGAGATAAGTTCATCAGAGTCGTTTCTTCGAGGAGGGCACAACAAGCCTAGCATTAGTGTGCACTCTGCAGGTCATGCTGTGCATGTTTTTATTAATGGGAAATTTTCAGGCTCTGCGTTCGGGACAAGGGAAGATAGAAGTTTCACATTTAATGGCCCTGTCAACCTACGTGCTGGAACTAATAAAATAGCACTTCTTAGTGTAGCTGTTGGATTGCCTAATGTTGGATACCATTTCGAAGCATGGAAGACAGGTATCACTGGTCCAGTTTTGCTCCAAGGTCTTGATCATGGACAGAAAGATTTGACATGGCAGAAATGGTCATACCAGGTTGGCCTAAAAGGAGAGGCTATGAATTTGGTGTCTCCAAATGGGGTTTCATCTGTTGATTGGGTCAGAGAGTCACTAGCTTCTCAAAGTCTGCAACAGCTGAAATGGCACAGGGCTTATTTCAATGCACCTGTGGGAAATGAACCATTGGCTTTGGACTTGGGAAGCATGGGAAAGGGTCAAGTATGGATCAATGGACAGAGCATAGGAAGGTATTGGATGGTTTATGCAAAGGGTGATTGTAAACCTTGCAGCTATGCGGGGACATACCGAGAGCCAAAGTGCCAACTTGGTTGTGGACAACCTACCCAACGATGGTACCATGTTCCAAGGTCTTGGTTAAAGCCAACAAGGAACTTAATTGTGGTTTTTGAGGAATTAGGTGGGAATCCTGAGAAAATATCTTTGGTAAAGAGGACAGTACACATTCCTGCTAGTAAACACAGTTCAGAGAACTGA 2232 0.4319 METTSVSKLLTLFFFTVLFVCSELIHCSVTYDKKAIVINGQRRILISGSIHYPRSTPEMWEDLIQKAKHGGLDVIDTYVFWNVHEPSPGNYNFEGRYDLVRFIKTVQKVGLYVHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKAAMQGFTQKIVQMMKNEKLFQSQGGPIILAQIENEFKLLGKGRALAPADYKYINWAAKMAVGLGTGVPWVMCKEDDAPDPVINACNGFYCDDFSPNKPYKPKLWTEAWSGWFTEFGGPIYQRPVEDLAFAVARFIQKGGSYFNYYMYHGGTNFGRSAGGPFVTTSYDYDAPIDEYGLLREPKYGHLKDLHKAIKQCEHALVSSDPTVTSLGTYEQAYVFSSGTGTCAAFLANFHSNSAARVTFKNKHYDLPPWSISILPDCKTDVFNTARVRFQASQIQMLPSNSRLFSWETYDEDITSLEESSRITASGLIDQINATRDTSDYLWYITSVEISSSESFLRGGHNKPSISVHSAGHAVHVFINGKFSGSAFGTREDRSFTFNGPVNLRAGTNKIALLSVAVGLPNVGYHFEAWKTGITGPVLLQGLDHGQKDLTWQKWSYQVGLKGEAMNLVSPNGVSSVDWVRESLASQSLQQLKWHRAYFNAPVGNEPLALDLGSMGKGQVWINGQSIGRYWMVYAKGDCKPCSYAGTYREPKCQLGCGQPTQRWYHVPRSWLKPTRNLIVVFEELGGNPEKISLVKRTVHIPASKHSSEN* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3280 743 Gene3D - 441 590 - -
Lja5g3280 743 SUPERFAMILY (Trans)glycosidases 28 347 IPR017853 -
Lja5g3280 743 PRINTS Glycosyl hydrolase family 35 signature 290 305 IPR001944 GO:0004553|GO:0005975
Lja5g3280 743 PRINTS Glycosyl hydrolase family 35 signature 650 666 IPR001944 GO:0004553|GO:0005975
Lja5g3280 743 PRINTS Glycosyl hydrolase family 35 signature 60 78 IPR001944 GO:0004553|GO:0005975
Lja5g3280 743 PRINTS Glycosyl hydrolase family 35 signature 253 268 IPR001944 GO:0004553|GO:0005975
Lja5g3280 743 PRINTS Glycosyl hydrolase family 35 signature 115 134 IPR001944 GO:0004553|GO:0005975
Lja5g3280 743 PRINTS Glycosyl hydrolase family 35 signature 310 326 IPR001944 GO:0004553|GO:0005975
Lja5g3280 743 PRINTS Glycosyl hydrolase family 35 signature 39 56 IPR001944 GO:0004553|GO:0005975
Lja5g3280 743 PRINTS Glycosyl hydrolase family 35 signature 623 637 IPR001944 GO:0004553|GO:0005975
Lja5g3280 743 PRINTS Glycosyl hydrolase family 35 signature 172 187 IPR001944 GO:0004553|GO:0005975
Lja5g3280 743 Gene3D Glycosidases 22 346 - -
Lja5g3280 743 Pfam Glycosyl hydrolases family 35 36 342 IPR031330 -
Lja5g3280 743 Gene3D - 607 735 - -
Lja5g3280 743 PANTHER BETA-GALACTOSIDASE 3 738 - -
Lja5g3280 743 SUPERFAMILY Galactose-binding domain-like 586 733 IPR008979 -
Lja5g3280 743 SUPERFAMILY Galactose-binding domain-like 405 577 IPR008979 -
Lja5g3280 743 Pfam Beta-sandwich domain in beta galactosidase 350 421 IPR041392 -
Lja5g3280 743 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 174 186 IPR019801 GO:0004553|GO:0005975
Lja5g3280 743 PANTHER BETA-GALACTOSIDASE RELATED 3 738 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3280 Lja-Chr5 63261563 63268310 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3280 5 63261563 63268310 Lja4g3179 4 60124214 60130088 ECH
Lja5g3280 5 63261563 63268310 Lja5g3280 5 63261563 63268310 ECH
Lja5g3280 5 63261563 63268310 Lja1g3554 1 44246291 44251480 PCT