Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3277 ATGACTCCTTTCATCAAAGTTTCTCTTGCAATAGCTTTTCTCTCAGTTACACTCTCTCAAGCTCACCCTGATGGCTTCCATTTTGGCTGGGGTGGTCGTGGTGGAACTGGAGGAATGTCTTTTGGTCTCTCTCCTCAATTCTATCAGTTTTCATGCCCTCAAGCTAATGACATTGTCATGTCAGTGTTGGAGAAGGCCATTTCTAAGGACATGAGGATGGCTGCTTCTCTTCTCAGACTTCACTTTCATGACTGCTTTGTGCAGGGTTGTGATGCATCAATTTTGTTGGATGATAGTGCGACAATTGTTAGTGAGAAAAATGCAGGACCTAACAAAAATTCTGTCAGAGGTTATAAAGTGATTGATGAGATCAAGTCCAAGTTGGAAGAAGCATGTCCTCTTACTGTCTCCTGTGCTGACATTGTTGCCCTTGCTGCCAGGGGATCCACTATTCTAAGTGGAGGACCTAACTGGGAGCTCCCATTAGGCAGGAGAGACTCAAAAACTGCAAGCCTCAGAGGTGCAAACAAGAACATTCCCCCACCAAATGCCACCATTGAAAGTCTCCTAACGTTTTTCAAGCGTCAAGGCCTTGATGAAGTAGACCTCGTTGCCCTCTCAGGTGCCCATACCATTGGGGTGGCAAGATGTGCAACATTCAAGCAGAGACTGTACAACCACAATGGAAACAACCAACCAGATGAGAATCTAGAAAAGTCCTTTTACTCCGGTTTGAAGACAGTGTGCCCAAAATCAGGTGGTGACAACCTGATATCTCCCTTGGACTTTGGCTCCCCGAGAATGTTTGACAACACCTACTTCAAGCTCATACTCGGAGGAAAAGGTCTTCTCAATTCAGATGAAGTGCTTCTCACAGGGAGTGTTAAGGAGACTCGTGAACTGGTCAAGAAATATGCACAAGATGAGGCACTCTTCTTTGAGCAATTTGCCTTGTCCATGATCAAGATGGGGAACCTTCGTCCTCTCACTGGATTTAATGGTGAAGTTAGGAAGAATTGTCACCGAGTTAATTAA 1035 0.4502 MTPFIKVSLAIAFLSVTLSQAHPDGFHFGWGGRGGTGGMSFGLSPQFYQFSCPQANDIVMSVLEKAISKDMRMAASLLRLHFHDCFVQGCDASILLDDSATIVSEKNAGPNKNSVRGYKVIDEIKSKLEEACPLTVSCADIVALAARGSTILSGGPNWELPLGRRDSKTASLRGANKNIPPPNATIESLLTFFKRQGLDEVDLVALSGAHTIGVARCATFKQRLYNHNGNNQPDENLEKSFYSGLKTVCPKSGGDNLISPLDFGSPRMFDNTYFKLILGGKGLLNSDEVLLTGSVKETRELVKKYAQDEALFFEQFALSMIKMGNLRPLTGFNGEVRKNCHRVN* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3277 344 ProSitePatterns Peroxidases proximal heme-ligand signature. 202 212 IPR019793 -
Lja5g3277 344 SUPERFAMILY Heme-dependent peroxidases 42 344 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja5g3277 344 PANTHER PEROXIDASE 72-RELATED 31 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g3277 344 CDD secretory_peroxidase 42 343 IPR033905 GO:0004601|GO:0042744
Lja5g3277 344 PRINTS Plant peroxidase signature 135 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g3277 344 PRINTS Plant peroxidase signature 52 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g3277 344 PRINTS Plant peroxidase signature 76 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g3277 344 PRINTS Plant peroxidase signature 318 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g3277 344 PRINTS Plant peroxidase signature 276 293 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g3277 344 PRINTS Plant peroxidase signature 201 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g3277 344 PRINTS Plant peroxidase signature 260 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g3277 344 PRINTS Plant peroxidase signature 154 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g3277 344 PRINTS Plant peroxidase signature 116 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g3277 344 Gene3D - 47 344 - -
Lja5g3277 344 Pfam Peroxidase 61 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g3277 344 PRINTS Haem peroxidase superfamily signature 136 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g3277 344 PRINTS Haem peroxidase superfamily signature 262 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g3277 344 PRINTS Haem peroxidase superfamily signature 202 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g3277 344 PRINTS Haem peroxidase superfamily signature 74 88 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g3277 344 PRINTS Haem peroxidase superfamily signature 154 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g3277 344 ProSiteProfiles Plant heme peroxidase family profile. 42 344 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g3277 344 PANTHER PEROXIDASE 31 343 - -
Lja5g3277 344 ProSitePatterns Peroxidases active site signature. 74 85 IPR019794 GO:0004601
Lja5g3277 344 Gene3D Peroxidase, domain 2 180 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3277 Lja-Chr5 63225013 63227279 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3277 5 63225013 63227279 Lja5g3277 5 63225013 63227279 ECH