Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3272 ATGGGATCAGTTTGTTGTGTTGCTGCGAAAGATCATAGTCTTCCTAACACAACTGGAGGTGAGAGTTTGCATAGAGATGTTGTGTGTTCTCCGTCTTGGAGCTTTCAGTGGGATAGTCGGGGACGTGTTGCTGATGAAATTGAGAATCCTTCATACCACACGTCCCGTGTGGTCAGCAGAAATGTAAGCATGGAGTTCAAAGGTTCGTTAAGTTCTGAAAGAGGTAATTTATCTGATGGGGGCAGCATCCTGGAGAATTCTGTGACTCCTATTTCTCTGAAGTCCCCTGTTGATGACGCATTATCTTCTGATCTGTCCATGTCAAGCAATTTTTCTACAGTGGTGAAGAATCAGGCTGAATCTCCAATACATAATCTTTCCTTTTCAATACCTTCAGTTTTCTCAACGCCTACAGCAGATCTTTCATCTAATCATGATTATCATCGTCATCCCACCTCTACCCCGACAAGATGGGCACATCGATCTCCTGGCTACCCTCTGTTGAGACAGATTTCTGACAATCAGATCCTGGGTCTGAAATCACCTGACAACTCAATTTCTGAAGGAAGGCCATCATTTGTACTCTCCACCTGCAGCAACGAAATAGCAGCTGGATCCCAATGCGGATCATCTGATGGCTGGTCCATGCGCACCTTTTCTGAGCTGGTGGCCTCATCGCAAAGAGAAGGGTTGTCTTTTGATAGTGAGTGTTTAGGCTCAGGTCGTCGCAAGTTAAGTGGCTGTAGTAGTAGGTTCTCATATTCCCCTTCGATGGATCTTCGATCATGTGGGGCTTGCTCAAGACTTTTGACTGAGAGATCAGCTTGGAACAACCAGAAGTTTGTTGCCAACAATGACCTCTCAGTTGTTGCTGTACTGGACTGTGGTCATGCATATCATGCAGAATGCTTAGAGACCATGACAACAGAGGTAGATAGGTATGATCCAGCTTGTCCAATTTGTATGGTTGGAGATAAGCACTTGTCGAAGATGTTCAGAAAAGGTCTTAGAGCTGAATCAGAGATAAAGGCCAAGAACCACAAAATATCCAAGAACAGGGTTATTGATAGCTATCTTGATGGTGGTTTTGATGTTTTTGATCGACAAAAAGAATGGGGAGGAAAAATTCCAAAGATGGAGCCTAGCTCCAGTGCAAGGAGCTCAAATGGAAAGCCTTTCTTGAGGCGTCACTTTTCAATTGGGTCCAAGTGGAGGCGATCAATGTCTGAGAATGATTCTGCCAGGAAGAAAGGCTTTTGGGCAAGATATCGTAAAGATTGA 1281 0.4442 MGSVCCVAAKDHSLPNTTGGESLHRDVVCSPSWSFQWDSRGRVADEIENPSYHTSRVVSRNVSMEFKGSLSSERGNLSDGGSILENSVTPISLKSPVDDALSSDLSMSSNFSTVVKNQAESPIHNLSFSIPSVFSTPTADLSSNHDYHRHPTSTPTRWAHRSPGYPLLRQISDNQILGLKSPDNSISEGRPSFVLSTCSNEIAAGSQCGSSDGWSMRTFSELVASSQREGLSFDSECLGSGRRKLSGCSSRFSYSPSMDLRSCGACSRLLTERSAWNNQKFVANNDLSVVAVLDCGHAYHAECLETMTTEVDRYDPACPICMVGDKHLSKMFRKGLRAESEIKAKNHKISKNRVIDSYLDGGFDVFDRQKEWGGKIPKMEPSSSARSSNGKPFLRRHFSIGSKWRRSMSENDSARKKGFWARYRKD* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3272 426 PANTHER EXPRESSED PROTEIN 1 420 - -
Lja5g3272 426 SUPERFAMILY RING/U-box 262 322 - -
Lja5g3272 426 MobiDBLite consensus disorder prediction 408 426 - -
Lja5g3272 426 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 247 323 IPR013083 -
Lja5g3272 426 SMART ring_2 263 321 IPR001841 -
Lja5g3272 426 MobiDBLite consensus disorder prediction 141 162 - -
Lja5g3272 426 ProSiteProfiles Zinc finger RING-type profile. 263 321 IPR001841 -
Lja5g3272 426 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 1 420 - -
Lja5g3272 426 MobiDBLite consensus disorder prediction 374 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3272 Lja-Chr5 63166354 63169849 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3272 5 63166354 63169849 Lja5g3272 5 63166354 63169849 ECH