Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3269 ATGGGTTCTGTGCAAGGACCAGCTGTGTGTCCATCTAAACTTGCTGGGTTCTGCAGTCTTCCAATGATGGGGCCAATGAATGTGAGATGTATTAGAAGTGAATTTTTGGGACTCAATGGCGGCGGTTCCAAGGCTAAGCAGCGGGGTTTCCTTTCTTGCGATGTAAACACACGAAAGTGCTGGACGGTAGTTCGTTGTAGTTTCAATCCATCATCCTCAAATGACAGTGAGAATTTCATTGAAAAAGATGAAGAGTATGTTAACTCTAGTGTGATTGAAGCTGTTGAGGTGAAGAGTGGAGCAGATGGTTTCATAATCAAAATGAGGGATGGAAGACACTTGAGATGCGTTCACAACAATCCTCAGGGAGGACATCTTCCAGATTATGCACCACATCCTGCTATTGTATTGAAGATGGAAGATGGGACTGGTCTACTTCTTCCTATAATTGTTTTGGAGATGCCAAGCGTCTTGCTAATGGCAGCAATACGCGATGTTCCTATAGCCAGACCTACTTTGTATCAAGTAGTGAAGGAAATGATTGACAAGATGGGTTATGAAGTGAGACTTGTCAGAGTGACTAGGAGAGTCCATGAGGCATATTTTGCCCAGTTGTATCTTACCAAGGTTGGGAATGAGGCAGAATGTCGGACTTTCGACCTTCGACCTTCAGATGCTATCAATATTGCAGTAAGATGCAAGGTGCCAATACAAGTCAACAAGTACTTGGCATACAGTGATGGAATGAGAGTAATTGAATCAGGCAAACTGTCAACACAGTTCCCTGGTTTCGATGGCCGATTATTTACTGAAATGGACCGGCCAAATGGTCAGCCATGTGTTGAAACTGAGGAATTCAATCTTTTGCACAACATGTTGAAAGCTGTTGGTGAAGAACGCTATAAAGATGCTGCTTTGTGGAGGGACAGACTTAATCAACTTAGGGCTGGAAAAAATGTGAATAACAGATCCTGGACACTTTAG 984 0.4319 MGSVQGPAVCPSKLAGFCSLPMMGPMNVRCIRSEFLGLNGGGSKAKQRGFLSCDVNTRKCWTVVRCSFNPSSSNDSENFIEKDEEYVNSSVIEAVEVKSGADGFIIKMRDGRHLRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAIRDVPIARPTLYQVVKEMIDKMGYEVRLVRVTRRVHEAYFAQLYLTKVGNEAECRTFDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRVIESGKLSTQFPGFDGRLFTEMDRPNGQPCVETEEFNLLHNMLKAVGEERYKDAALWRDRLNQLRAGKNVNNRSWTL* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3269 327 PANTHER VON HIPPEL-LINDAU PROTEIN 1 322 - -
Lja5g3269 327 Gene3D Bifunctional nuclease domain 122 256 IPR036104 GO:0004518
Lja5g3269 327 SUPERFAMILY Hypothetical protein TM0160 116 254 IPR036104 GO:0004518
Lja5g3269 327 Pfam Bifunctional nuclease domain 135 245 IPR003729 GO:0004518
Lja5g3269 327 PANTHER NUCLEASE IN BASAL DEFENSE RESPONSE PROTEIN 1 322 - -
Lja5g3269 327 ProSiteProfiles Bifunctional nuclease (BFN) domain profile. 116 251 IPR003729 GO:0004518
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3269 Lja-Chr5 63120746 63125070 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3269 5 63120746 63125070 Lja5g3269 5 63120746 63125070 ECH