Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3263 ATGGAAACCGTAGAAGTACTTCACATGAACAAAGGAGTAGGGGAGACTAGCTATGCCATGAACTCTACTGTTCAGAACAAGATCATATATGTGACAAATCCAGCAACAAAGAAAGCTATCGTGGAGATTCTATGCTCAAGTAGGCCAATGAGGATGGGCATTGCAGACTTGGGTTGCTCCTCTGGACCCAATGCCTTGAGAGTCATTTCAGAGATAGTGGATGTTGTTCATGCCAACTCACGCGTGTTAGATTGCCCAGTACCTGAGTTGGTAGTGCATTTGAATGACCTCTTCACCAATGACTTCAACACTGTCTTTGATTCATTGCCATCTTTCTACAAAACACAGAGGCAAGAAAAAGGAAATGAGTTTGGGTCGACATGTTTTGTTTCAGCTGTCCCGGGTAGTTTCTATGGTAGGCTCTTCCCAAGCAAGAGCCTCCACTTAGTGCACTCTTCTTCTAGCCTCCATTGGCTTTCTCAGGCTCCTTTGGATTTGAAGGATGGTTGGGGGAGAGGACTGAACAAGGGAAAGATCTACATTTCAAAGAGTAGTCCCCAGTGTGTGTTAGATGCTTATTTACGTCAATTCCAAAATGACTTTTCACTGTTCCTGCAATCCATGGAACCAACAACGCCCCATTGTTGCTACCAGTGGGAATTGTTAGCCCAGGCTCTCATGAGCATGGTTTCAGAGGGTCTTGTGGAAGAGAAAAAATTGGACTCTTTTGATGCTCCTTACTACGCACCATGCATAGAGGAAATGAAATTAGAGATTGAAAAGGAAGGTTCATTCATGGTAGTTTGTCATGAAGCTTATGAAATTAACTGGGATGCTGGAATGGAACAGCAAAGTGATTCAACATCAAGTGGCGAACTAGTTGCAAGGACCATAAGGGCTGTGGTTGAATCCATGTTGGAATTTCATTTTGGGAGTCATATAATAGATGAGGTGTTTCGAAGATATGCCAAACTTGTGGAGGAACATTTGTCCAAAAATAGGACCAAATACATCAATTTGGTCATTTCTCTTGTCAAGCGAAATTGA 1047 0.4279 METVEVLHMNKGVGETSYAMNSTVQNKIIYVTNPATKKAIVEILCSSRPMRMGIADLGCSSGPNALRVISEIVDVVHANSRVLDCPVPELVVHLNDLFTNDFNTVFDSLPSFYKTQRQEKGNEFGSTCFVSAVPGSFYGRLFPSKSLHLVHSSSSLHWLSQAPLDLKDGWGRGLNKGKIYISKSSPQCVLDAYLRQFQNDFSLFLQSMEPTTPHCCYQWELLAQALMSMVSEGLVEEKKLDSFDAPYYAPCIEEMKLEIEKEGSFMVVCHEAYEINWDAGMEQQSDSTSSGELVARTIRAVVESMLEFHFGSHIIDEVFRRYAKLVEEHLSKNRTKYINLVISLVKRN* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3263 348 Gene3D - 6 192 IPR042086 -
Lja5g3263 348 Gene3D - 208 333 IPR042086 -
Lja5g3263 348 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 347 IPR029063 -
Lja5g3263 348 Pfam SAM dependent carboxyl methyltransferase 39 207 IPR005299 GO:0008168
Lja5g3263 348 Pfam SAM dependent carboxyl methyltransferase 210 346 IPR005299 GO:0008168
Lja5g3263 348 Gene3D Vaccinia Virus protein VP39 21 207 IPR029063 -
Lja5g3263 348 Gene3D Vaccinia Virus protein VP39 246 334 IPR029063 -
Lja5g3263 348 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 6 342 IPR005299 GO:0008168
Lja5g3263 348 PANTHER JASMONATE O-METHYLTRANSFERASE 6 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3263 Lja-Chr5 62981002 62985435 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3263 5 62981002 62985435 Lja5g3263 5 62981002 62985435 ECH