Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3259 ATGGGTTCGGCAGCCAAAACAGTTTGTGTTACGGGGAGTACCGGTTTCATCGGGTCATGGCTTGTCATGAGACTCATGGAGCGCGGCTACATGGTTCGAGCCACCGTACAACGCGACCCAGAAAACATGAAGAAGGTGAAGCATTTGCTGGAACTGCCTGGTGCAAAGACCAACCTTACTATTTGGAACGCCGATCTTACTGAAGAGGGAAGCTTTGATGAAGCCATCAATGGGTGCTCCGGAGTTTTCCATTTGGCCACCCCCATGGACTTTAATTCCAAGGATCCTGAGAATGAAGTGATCAAGCCTACCATAAACGGGGTGCTAGACATCATGAAAGCATGCCAGAAGGCTAAAACTGTACGGAGGCTGGTTTTCACATCCTCCGCAGGTACCCTCGACGCTGTAGAGCACCAAAAACAAATGTTTGATGAAAGCTGCTGGAGTGACGTTGAGTTCTGCCGGAGAGTAAAGATGACTGGTTGGATGTATTTTGTTTCAAAGACACTGGCAGAGCAAGAAGCATGGAAATTTGCCAAAGAGCATGACATTGACTTCATTACAACCATTCCATCCCTTGTTGTTGGTTCCTTTCTAATGCCAACAATGCCACCTAGCCTAATCACCGCTCTTTCTCCCATCACCGGAAACGAGGCCCATTATTCGATCATAAAGCAAGGCCAATTTGTCCATTTGGATGATCTTTGTCTAGCCCATATTTTCCTGTTTGAGCACCCTGAATCAGAAGGAAGGTATATCTTGTCTGCATCTGAGGCTACTATCCATGACATTGCAAAGTTAATTAACTCAAAGTATCCAGAGTACAATGTCCCCACTAAATTTTCATCAAAGAAGATCAAAGAAATGGGGTTCGAATTTAAATACAGCTTAGAGGATATGTACACTGGAGCAATTGACACATGCAAGGAAAAAGGGCTTCTTCTTAAAGCTGCAGAAAATCCAAGCAATGGCATAACAGAGAAATAA 987 0.4478 MGSAAKTVCVTGSTGFIGSWLVMRLMERGYMVRATVQRDPENMKKVKHLLELPGAKTNLTIWNADLTEEGSFDEAINGCSGVFHLATPMDFNSKDPENEVIKPTINGVLDIMKACQKAKTVRRLVFTSSAGTLDAVEHQKQMFDESCWSDVEFCRRVKMTGWMYFVSKTLAEQEAWKFAKEHDIDFITTIPSLVVGSFLMPTMPPSLITALSPITGNEAHYSIIKQGQFVHLDDLCLAHIFLFEHPESEGRYILSASEATIHDIAKLINSKYPEYNVPTKFSSKKIKEMGFEFKYSLEDMYTGAIDTCKEKGLLLKAAENPSNGITEK* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3259 328 Pfam NAD dependent epimerase/dehydratase family 8 249 IPR001509 -
Lja5g3259 328 Gene3D - 1 326 - -
Lja5g3259 328 PANTHER DIHYDROFLAVONAL-4-REDUCTASE 2 3 319 - -
Lja5g3259 328 CDD FR_SDR_e 8 291 - -
Lja5g3259 328 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 319 - -
Lja5g3259 328 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 308 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3259 Lja-Chr5 62941309 62956799 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3259 5 62941309 62956799 Lja5g3259 5 62941309 62956799 ECH