Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3254 ATGGAGTCCGGAGCCGCCACCGCGACTCTCTCCAAGAAGCTTTCGAACGGCTATGGCGTGTCCGGAAGATCCGCGTACGAAGGCGTTTTCGCTGCTCCGATTAAGCACAGAGCACCGAGCTTCGCTTCTCCGCTCGGTGATTACCGGGAGATTTTCGGAGCCGGCTCCGGAGCTTGTTCATCGATTCCGATTCTCGAGCTTCCGGACCTCAACGAGATGAGAGCGGCGATGGATGACGTTAGCCGCTCGAAGCTCGATTACTCGAAGGTCTTCGGTGGGTTCGGGGATGTAGACGGTGCTGTGCCTCTCGAGGACCTGGTTGCTCAGACTAAAGTGGCAGAAGATAGCTTCACCAGCAGAGCACCGGCACGGAGCAAAGTCAAAAGCGGAAACCAATCTTACCAGGAAGATCGTACTGATTGTTCGAAGGAAATTCCAGCAGCATCACAGTCATCCAATGATGCCAAAAGGATCAATATGTCATATCATCAAGTTAGCCAAGGAAGTCAAAATGGAACAAGTGCGAAAACACATATAGCTCAAGTCCATGCTGTCCCTGCTTACACCTGTTTAAGTGAAGAAGTCAACTCAGTGAAGACGAACAGAGCTAATAAGCCTACTCCAGTAGCACAGGATACTTGTTCTTCCAGTTATTGCAATGAGAAGATAAAGGAAGGTGGACACTGTATGGAATCATTTACTGGCCCTTCACCTGCTCATGCTAAGAAACAGTCTACCGACCATGGAGTTAAAGTTAAACATAGGTCTAACTCTGTTGACCTGTCTTATGATGCTCGTGAGATTAGCAGTGGAAGTAATGTAACACATCACCCCAAAGTTCCTCCATCTGAGACTATGGCAAGTAAGTTGGATAATAAAAATAATGGTGATGCTATGAGATCAAAGGAAACCAAAAGCCAGACATCTAAAAGTGGCGCACCTGAAAGTGCTACTGGTGCTGATTCACCGTCATACTTAGATGATGTGGTAGACTCAAATTCAGTGGCTGCTGCTTCTGTGGCAGCTTTAAGGAAGGCAATAGAAGAGGCTCAAGTAAGAATGAAGGTTGCAAAAGAATCAATGAGAAGAAAGAAAGAAGGTTTTCCTGATCGTGTCAAACGAAAGTCTAATGTTGACTTGATAGCTGGGGGAAGAAAGGGGGCTAAACTCGAAAATAAAACAATGAAACCTGAAGAGATTAATACAATGCAAACATTTGGAGAAATGGATGCTCTTAGGAAAGTTTCTTCTGAGCTAGGAAAGCCAAAGGTGAGAATAGAGCAAGTAAGATCAAATCTTGGGGCTGAAGAAATGTTTGTTGCTAAAGAAGCTGTACGAGATGCACAGGTGAAATTGAGATCATCTCAAGCAGAACATATGGAAGACATTGAACAGAAAGAAGCAGATCACAAAGGAAAAGTTCTTGAGCTTAAACAGGCTGAAAATACTGAGAAAGGGGCGCGTATTAAAAGCACTGGCAGGAATGCCTCTGAGAAACCAGAAACACCTGATCATACAGTTAAAGTGATGAAGGAATCAGGTGCTTGTGAAGAACTTGTCCATGAAGTAGAATATAGGCTTCAAGAAGTTGTGGATGAAACAAAACTGATTCAGGAGACACTTGATAATGCAACAGACAAGAGAATGACGGTTAATGAAGATGGAAATGTTGAGAATAAAGTTACTCCTTTTCATGAACCAGAAGACTATGCAAGTAACCTGGGTGGGGAAGGGTTTATAATTGAAAATAAAGAAAAAGTTGCATGTGAACCAGAAGATGGTAAAATGGTTGAAGAGTCCTTGGAGCTGGAAGGATGTCAAAAATTCTTTAGAGCTACTGAGGAACTGGGAGAAGGTAAGAGCATTGTTCAAGAGCAAAAAGGAAGTGAGGGTAAAGTTGAAGTGTCCAGTGGGGTGGAAGAATGCGAATTGACAGAATTTCTTGAGCCAGTAGACAACGAGAGAGTGTGCAGTTTCCATGGTTCAGACTCAATAAGTAAGGAGAATGAAATAGAAAACGTGGGGGGTTTAGAGGATAGAAATAGAAGGAATGAATGTAGTTTTCTGGATATTAATCAAGAGACGCGACATTCCTGTCAGAGAGATGCTAATGATGATACATTTAGCAATGTCTATGTGCAGGAAATAATGGAGGACATTCTGGACCATGTTCATGATGATGAAGAAATTTATGAAAGAAATGTAAAGGATAGTGAATTAGATGGAAATGGGACAGTTCAAGATGCCCAAGCAAGCGAGGATGAATTTAAAGGAGCCACACATCTGGAAGATAGTGAGCGGGAAAGGAAAGACAATGCGGTTCCAGTAGAAGTGATGAGAGTAACTCAAACTGATCCTAACTATGAGGAGACAAGAGCAGGGGTAGCTGTCAATGCTACAGAAACTAGTTCTAGCCATGATTTTGATGAAACTATGAAGTTGCACAGAACTCAGATAGCTGATACAATTATTGAAAATGATGAAACTCTTGAAGTAACTCTGGATGATATAATGATAGCAAGTAAAGCTTCATTTCAACATCAAGAAGAAAATGACTGCAATCTGTCAATGCTTGTTGAAGAAACAACTCCTGAATCTGTAGAAGTATGTAAGGATACAAAGGAGGCTACAGTTGCTTCAAATATTGGTGAACCTGACATGAAGGCTTGGCACAATGAAGATCAGTTCTTTGAAAAAGCAGAGAATGACCGCAATCCGCCAGTGCTTGTTGACGAAACAACTGAATTTGTAGAAATATGGGAGGACGCAAAGGAGAATACAGTTGCTACAAATATGGGTGAAACTGACTTAAAGGTTATGCAAAATCAAGATCAGTGCTTGGGAAAAGCAGAGAATGACTGCAATCCGGCAGTGCCTGTTGAAGAAACAACTTCTGAGTCTGTAGAAACATGTACGGATGCCATGGAGACTAGATTTGCATCAGATGAAGAGATAGATGAGAAACGATCTTACTCCTCTTCTGAGGAAATTTTGTTTGACAAAAAAGACAAGATAGACTCATCTCAGACACCTGCTATATCTGAATTGCAGTCAAGCCCCTACAAAAAAGAGGAGGTTAAATCCATGACAATGGAAGAGAAGGAAGCCATTGGTAAATCGCAGAAGGCAGAGCTGGAAAAGGGACGCCGAAAAAAAATTGATGAAGCAAAAGAGAGGGAAAGAGAAAAAGGAAAGGAGAAATTAGCTGTAGAAAGAGCAATCCGTGAAGCTCGTGAAAGGGCATTTGCTGATGCTAGGGGAAGGGCTGCTCTGGAGAGAGCTGCTGCTGAAGCACGTCAGAGAAATATTCCTGATGGACGAGAAAGGGTAGGTAAAATCTCTAGTCAGGCAAATGAGAAGACACCAGCTGAGAAGGCTGCCATGGAAGCAAAACTTAAAGCAGAACGTGCTGCTGTGGAGAGAGCAACTGCAGAGGCACGAGCACGTGCCCTTTCCAGGGCACTATCTGAGAAGGCTGCCTCTGAAGCAAGAAATAAATCTGACAAGTCTTTTGCAGAGAAGTACTTTGGATCTTCCAGAGATAATGTAAAGAAGCAAAACTTCCAGTCAAAATCTTTCAGCTATGGTGGTCGTGATTCTACTGATGCATTTGATGGAGCTAATGGTGATTCTGCTCAGAGATGTAAAGCCAGGTCCGAGAGGCATCAGAGAATAGGGGAACGTGTGGCGAAGGCTCTTGAAGAAAAGAATATGCGTGATAGGCTTGTGCAGAAAGAGCAAGAGGAGAGAAATAGGGTAGCCGAAGTTCTAGATGCTGATGTTAAAAGGTGGTCAGCTGGGAAGACAGGGAACTTGAGGGCATTGCTTTCAACATTACAATATATCCTTGGACCTGATAGTGGTTGGCAACCGATTCCTTTAACAGAGATAGTAGCCACATCTGCTGTGAAGAAAGCTTATCGTAAAGCTACTCTTTTTGTGCATCCTGACAAGTTGCAGCAGCGTGGGGCAAGCATTCAACAAAAGTACATTTGTGAGAAGGTTTTTGATCTTCTAAAGGTTCGGCATTCATCCACAGTTAAACAACATGAAAATTTAGTTGATCTTTACTCCACTTTTTCTCCACAAATGAAAAACATTCACAGTTTTTTTATGTTCTTCTCTTTAATTAGTAATACCGCCGGTTCCATAATCTCAACCTACAATAACAATGGTTTGCTTAAACTCTTTTCTCCTTAA 4200 0.4248 MESGAATATLSKKLSNGYGVSGRSAYEGVFAAPIKHRAPSFASPLGDYREIFGAGSGACSSIPILELPDLNEMRAAMDDVSRSKLDYSKVFGGFGDVDGAVPLEDLVAQTKVAEDSFTSRAPARSKVKSGNQSYQEDRTDCSKEIPAASQSSNDAKRINMSYHQVSQGSQNGTSAKTHIAQVHAVPAYTCLSEEVNSVKTNRANKPTPVAQDTCSSSYCNEKIKEGGHCMESFTGPSPAHAKKQSTDHGVKVKHRSNSVDLSYDAREISSGSNVTHHPKVPPSETMASKLDNKNNGDAMRSKETKSQTSKSGAPESATGADSPSYLDDVVDSNSVAAASVAALRKAIEEAQVRMKVAKESMRRKKEGFPDRVKRKSNVDLIAGGRKGAKLENKTMKPEEINTMQTFGEMDALRKVSSELGKPKVRIEQVRSNLGAEEMFVAKEAVRDAQVKLRSSQAEHMEDIEQKEADHKGKVLELKQAENTEKGARIKSTGRNASEKPETPDHTVKVMKESGACEELVHEVEYRLQEVVDETKLIQETLDNATDKRMTVNEDGNVENKVTPFHEPEDYASNLGGEGFIIENKEKVACEPEDGKMVEESLELEGCQKFFRATEELGEGKSIVQEQKGSEGKVEVSSGVEECELTEFLEPVDNERVCSFHGSDSISKENEIENVGGLEDRNRRNECSFLDINQETRHSCQRDANDDTFSNVYVQEIMEDILDHVHDDEEIYERNVKDSELDGNGTVQDAQASEDEFKGATHLEDSERERKDNAVPVEVMRVTQTDPNYEETRAGVAVNATETSSSHDFDETMKLHRTQIADTIIENDETLEVTLDDIMIASKASFQHQEENDCNLSMLVEETTPESVEVCKDTKEATVASNIGEPDMKAWHNEDQFFEKAENDRNPPVLVDETTEFVEIWEDAKENTVATNMGETDLKVMQNQDQCLGKAENDCNPAVPVEETTSESVETCTDAMETRFASDEEIDEKRSYSSSEEILFDKKDKIDSSQTPAISELQSSPYKKEEVKSMTMEEKEAIGKSQKAELEKGRRKKIDEAKEREREKGKEKLAVERAIREARERAFADARGRAALERAAAEARQRNIPDGRERVGKISSQANEKTPAEKAAMEAKLKAERAAVERATAEARARALSRALSEKAASEARNKSDKSFAEKYFGSSRDNVKKQNFQSKSFSYGGRDSTDAFDGANGDSAQRCKARSERHQRIGERVAKALEEKNMRDRLVQKEQEERNRVAEVLDADVKRWSAGKTGNLRALLSTLQYILGPDSGWQPIPLTEIVATSAVKKAYRKATLFVHPDKLQQRGASIQQKYICEKVFDLLKVRHSSTVKQHENLVDLYSTFSPQMKNIHSFFMFFSLISNTAGSIISTYNNNGLLKLFSP* 1400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3254 1399 Coils Coil 460 483 - -
Lja5g3254 1399 MobiDBLite consensus disorder prediction 120 153 - -
Lja5g3254 1399 Gene3D DnaJ domain 1223 1351 IPR036869 -
Lja5g3254 1399 PANTHER AUXILIN-LIKE PROTEIN 929 1340 - -
Lja5g3254 1399 MobiDBLite consensus disorder prediction 1096 1114 - -
Lja5g3254 1399 MobiDBLite consensus disorder prediction 754 771 - -
Lja5g3254 1399 PANTHER AUXILIN-LIKE PROTEIN 620 849 - -
Lja5g3254 1399 PANTHER AUXILIN-LIKE PROTEIN 849 881 - -
Lja5g3254 1399 Coils Coil 1125 1147 - -
Lja5g3254 1399 MobiDBLite consensus disorder prediction 230 325 - -
Lja5g3254 1399 MobiDBLite consensus disorder prediction 244 261 - -
Lja5g3254 1399 MobiDBLite consensus disorder prediction 1189 1222 - -
Lja5g3254 1399 Coils Coil 1042 1062 - -
Lja5g3254 1399 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 849 881 - -
Lja5g3254 1399 MobiDBLite consensus disorder prediction 1020 1066 - -
Lja5g3254 1399 MobiDBLite consensus disorder prediction 1096 1137 - -
Lja5g3254 1399 SUPERFAMILY Chaperone J-domain 1211 1340 IPR036869 -
Lja5g3254 1399 MobiDBLite consensus disorder prediction 480 506 - -
Lja5g3254 1399 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 620 849 - -
Lja5g3254 1399 MobiDBLite consensus disorder prediction 738 771 - -
Lja5g3254 1399 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 879 931 - -
Lja5g3254 1399 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 619 - -
Lja5g3254 1399 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 929 1340 - -
Lja5g3254 1399 MobiDBLite consensus disorder prediction 1002 1066 - -
Lja5g3254 1399 PANTHER AUXILIN-LIKE PROTEIN 879 931 - -
Lja5g3254 1399 PANTHER AUXILIN-LIKE PROTEIN 1 619 - -
Lja5g3254 1399 Coils Coil 340 360 - -
Lja5g3254 1399 MobiDBLite consensus disorder prediction 262 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3254 Lja-Chr5 62842509 62849863 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3254 5 62842509 62849863 Lja5g3254 5 62842509 62849863 ECH
Lja5g3254 5 62842509 62849863 Lja1g3606 1 44774311 44779562 PCT