Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3252 ATGGGAGCAGAACCCCTGTCCACCACCACCACAGACCACCAAGTGGTACCATTGGTTCTCGGGCTTGCACCTTCAGCCCTCGTCGATCACGTCGCTCGCGTCGGTGGGGCCTTCCTCGAGCAAATTCCTGGTGAACAAGGTGGCTCCATTCCTGTTGCGCTTGAAGAGCTTGAACATATACTGAGGGAGGTCAAAGCTCATGTTCTCTCATGCCCTGATGAGACTTCTACCGTCAAGACCATGGCTGGAGGCAGTGTTACGAATACAATTAGAGGGCTGAGTGGTGGATTTGGGATTTCAAGTGGAGTCATTGGGGCGTGTGGGGATGATGAGCAGGGGCAGCTATTTGTCCATAACATGGTCTTCAATGGAGTGGAACTCTCAAGGCTCAGGAAGAAGAAAGGACACACAGCACAGTGTGTGTGCTTGGTTGATGCCTTGGGAAACCGTACCATGCGACCCTGTCTCTCAAGTGCTGTCAAAGTTCAGGCAGAAGAATTGACCTCAGAGGATTTCAAGGGCTCTAAGTGGTTGGTGTTGAGATTTTCAGCATTTAATTTGGAAGTTACTCAAAAAGCCATTCTTTTAGCCAAACAGGAAGGTCTTCTTGTTTCCTTGGATTTGGCCAGTTTTGAGATGGTTAGGAATTTTAAACAACCACTGCTGAAGCTACTTGAGTCTGGAAACATAGATCTTTGCTTTGCCAATGAAGATGAGGCAACTGAGCTTCTAAGGGGAGAACAGAATGCTGATCCTGTAGCTGCTGTAGAATATCTAGCCAAATACTGCAAATGGGCTGTAGTAACATTAGGTTCTAATGGATGCATTGCTAAACATGGAAACGAGGTTGTACAAGTCCCTGCCATAGGAGAATCAAAGGCAAGTGATGCTACAGGAGCTGGGGATCTTTTTGCAAGTGGATTCTTGTATGGGGTGATTAAAGGTCTGTCACTTGAAGAATGCTGCAAAGTAGGCTCATGCAGTGGTGGGGCTGTGATTCGCTCTCTTGGTGGTGAAGTGACATTAGAGAATCGGCAGTGGATGTACAAGCACATGCAGTTAAAGGGTCTTCTCACGCCTGATACATCCAAATGA 1095 0.4749 MGAEPLSTTTTDHQVVPLVLGLAPSALVDHVARVGGAFLEQIPGEQGGSIPVALEELEHILREVKAHVLSCPDETSTVKTMAGGSVTNTIRGLSGGFGISSGVIGACGDDEQGQLFVHNMVFNGVELSRLRKKKGHTAQCVCLVDALGNRTMRPCLSSAVKVQAEELTSEDFKGSKWLVLRFSAFNLEVTQKAILLAKQEGLLVSLDLASFEMVRNFKQPLLKLLESGNIDLCFANEDEATELLRGEQNADPVAAVEYLAKYCKWAVVTLGSNGCIAKHGNEVVQVPAIGESKASDATGAGDLFASGFLYGVIKGLSLEECCKVGSCSGGAVIRSLGGEVTLENRQWMYKHMQLKGLLTPDTSK* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3252 364 SUPERFAMILY Ribokinase-like 25 338 IPR029056 -
Lja5g3252 364 CDD adenosine_kinase 19 337 - -
Lja5g3252 364 PANTHER CARBOHYDRATE KINASE-LIKE 1 355 - -
Lja5g3252 364 Pfam pfkB family carbohydrate kinase 71 340 IPR011611 -
Lja5g3252 364 Gene3D - 19 346 IPR029056 -
Lja5g3252 364 PANTHER SUGAR KINASE 1 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3252 Lja-Chr5 62826719 62830368 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3252 5 62826719 62830368 Lja5g3252 5 62826719 62830368 ECH
Lja5g3252 5 62826719 62830368 Lja1g3581 1 44573131 44577395 PCT