Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja5g3247 | ATGACTTGGAGAACCTTACTCTCTCGCTGCACTTCAATACACACCATCAACAAGCTCAATGCAATCCCCAAATCCCATTTCCACGCTCGCTCCATCTTCAAACCTCTCCTCATTCCGCCACCCACCGCCACCGCCACTCGCCACCTCCATTCTCAACCCACCTCCAACTCGCTTGTCGACCCGGCGGCGATCCTCGCTCAGCGAAACGACGATGAGGACGACGACAATGGAACCACGAACGAGTTCCTCTCCCGGTTCGCCTGGATGATGCGGAAAAAGGTGAAGGAAGCGTACCCGGAGTCTGATAAAGCCACCATTGACGCCATGCTTCTTGTGATTGTTGACAGGGTTGTGTCGGAGATGGAGAAGGGCGGGTTGGGCGGCGCGGCGGCGTCGTCGGTTCGTCCTTCCGGGGATTTCAGTGAGGATTTGTGGACGACTGTGTGGGAGGTGAGTGGTAAGGTGCTGGAGGATATGAATAAGGAGAGGAAGAAGGAGAAGATGAAGGGCTTTTTGCAGTGTGAGGAGGTGAAGGAGATGTGTAGGTTTGCCGGCGAGGTCGGTATTCGCGGGGATATGCTTAGGGAGCTGAGATTCAAGTGGGCACGTGAGAAGATGGAGGAGCATGATTTCTATGAGGATTTGGAGAGGATGAGGAAAGAGGGAGATGTTGAAGAGACTGATGAACCTGAACATCATGTGAAAGAGGGAACTGAGGAGAAGGGTGAGGGTGAGGGTAAGGTTGCTGAACTTCCAAAGAGGAGGGGGAAGATGAAGTTTAAGCTTTATGGGCTTGATCTCTCTGATCCTAAGTGGGAGCAGGTGGCTGAAAAGGTCCATGAGTCAGGACAAGTGCTTTGGCCAGAGGAGCCAAAGGAAATAACTGGGAAATGCAAACTTGTTACTGAGAGAATCATGTCATTGAAGGAGGAGGAGGAGGAGGAGGATAACTTGACAACCCTGTTGGCTGATTGGGTGGAGCTTCTACAGCCTAAGAGGGTGGATTGGATCAATTTACTTGAACGATTGAAAGAGCAGAATCGTCCTTTGTATTTCAAGGTGGCAGAAATTATACTGACTGAAGATTCGTTCCAAACAAATATATCTGACTACTATAGGCTTATTGATATCTATGCTAAAGAGAACCGCTTTGATGATACTGAGAGGATCCTTAAGAAGATGAATGAAAACCAAATAGGGCTCGATGCTTCAACAGCCAGTGCATTGGTCCACCTGTACTGCAAGGTAGGCAATCTTGAACGTGCAAAAGAAGCTTTTGAGGTCTTGACTAGAAAGGGCTTTCAACCAGACATTAAAGTCTACAACTCAATGATCATGGGCTATGTAAATGCTGGTGATCCTAAGGCTGGTGAGAGTTTGATGAAGAAGATGGAGGAGAGAGGAGGTATTAAGCCCACAAAGGAAATATATACGGCATTGCTCCGAGCTTACTCTGAGCGTGGTGATGTTATTGGAGCTGGGCGAATTTCAACAGCTATGCAGTTTGCAGGATTCCAGCAGAGTATGGAGACATGCACCCTGCTTATTGAGGCACATTCACGAGCAGGTGACCCAGAACAAGCAAGAAACAACTTTGACTACATGATAAAATTTGGGCATAAGCCTGATGATAGGTGCACTGCTAGCATGATTGCGGCTTATGAAACGAAAAATTTATTGGACAAGGCATTAAATCTTCTTCTTGAGTTAGAGAAGGATGGGTTTCAGCCTGGGGTCGCAACTTATTCTGTTCTTGTGGACTGGCTTTCTAAAATGAATCTTGTTGATGAGGTTGAACAGCTTTTAAACAAAATTGCTCTTCTGGGCGAGGCACCTCCTTTTAGGATTCAAGTGAGTCTCTGTGGTATGTATGCAAGGTGCAAAATGGAGAAAAAGGCCCTTCAAACTCTGGGCGTTCTGGAAGCTAGAAAGGATGAACTAGGACCACAAGAGTTTCAGACAATTATACAAGACCTTATTGAAGGTGGGTTTCAGAAGCATGCACAAAGAATGTGTAAGATCATGGAAGCACAGGGTTTCACTCCATCATATGAGCTTAAGGGGGCCATCCAACATGGCATTATAATGCCAAGAAGGAGATGGTCATGA | 2109 | 0.4713 | MTWRTLLSRCTSIHTINKLNAIPKSHFHARSIFKPLLIPPPTATATRHLHSQPTSNSLVDPAAILAQRNDDEDDDNGTTNEFLSRFAWMMRKKVKEAYPESDKATIDAMLLVIVDRVVSEMEKGGLGGAAASSVRPSGDFSEDLWTTVWEVSGKVLEDMNKERKKEKMKGFLQCEEVKEMCRFAGEVGIRGDMLRELRFKWAREKMEEHDFYEDLERMRKEGDVEETDEPEHHVKEGTEEKGEGEGKVAELPKRRGKMKFKLYGLDLSDPKWEQVAEKVHESGQVLWPEEPKEITGKCKLVTERIMSLKEEEEEEDNLTTLLADWVELLQPKRVDWINLLERLKEQNRPLYFKVAEIILTEDSFQTNISDYYRLIDIYAKENRFDDTERILKKMNENQIGLDASTASALVHLYCKVGNLERAKEAFEVLTRKGFQPDIKVYNSMIMGYVNAGDPKAGESLMKKMEERGGIKPTKEIYTALLRAYSERGDVIGAGRISTAMQFAGFQQSMETCTLLIEAHSRAGDPEQARNNFDYMIKFGHKPDDRCTASMIAAYETKNLLDKALNLLLELEKDGFQPGVATYSVLVDWLSKMNLVDEVEQLLNKIALLGEAPPFRIQVSLCGMYARCKMEKKALQTLGVLEARKDELGPQEFQTIIQDLIEGGFQKHAQRMCKIMEAQGFTPSYELKGAIQHGIIMPRRRWS* | 703 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja5g3247 | 702 | Pfam | PPR repeat | 549 | 575 | IPR002885 | - | |
| Lja5g3247 | 702 | Pfam | PPR repeat | 374 | 398 | IPR002885 | - | |
| Lja5g3247 | 702 | Pfam | PPR repeat | 581 | 605 | IPR002885 | - | |
| Lja5g3247 | 702 | Pfam | PPR repeat | 511 | 539 | IPR002885 | - | |
| Lja5g3247 | 702 | TIGRFAM | PPR: pentatricopeptide repeat domain | 511 | 543 | IPR002885 | - | |
| Lja5g3247 | 702 | TIGRFAM | PPR: pentatricopeptide repeat domain | 406 | 438 | IPR002885 | - | |
| Lja5g3247 | 702 | TIGRFAM | PPR: pentatricopeptide repeat domain | 440 | 473 | IPR002885 | - | |
| Lja5g3247 | 702 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 402 | 436 | IPR002885 | - | |
| Lja5g3247 | 702 | Gene3D | Tetratricopeptide repeat domain | 497 | 694 | IPR011990 | GO:0005515 | |
| Lja5g3247 | 702 | Gene3D | Tetratricopeptide repeat domain | 339 | 496 | IPR011990 | GO:0005515 | |
| Lja5g3247 | 702 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 437 | 471 | IPR002885 | - | |
| Lja5g3247 | 702 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 508 | 542 | IPR002885 | - | |
| Lja5g3247 | 702 | PANTHER | OS07G0661900 PROTEIN | 21 | 694 | IPR044657 | - | |
| Lja5g3247 | 702 | PANTHER | PROTEIN NUCLEAR FUSION DEFECTIVE 5, MITOCHONDRIAL | 21 | 694 | - | - | |
| Lja5g3247 | 702 | Pfam | Pentatricopeptide repeat domain | 429 | 486 | IPR002885 | - | |
| Lja5g3247 | 702 | MobiDBLite | consensus disorder prediction | 220 | 248 | - | - | |
| Lja5g3247 | 702 | Coils | Coil | 308 | 328 | - | - |
Event-related genes