Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3243 ATGGCAGCCATTTCTTCATACAAGATTATACTGGGTTCCTCCTCCGTCGCACGCCGCAAGATCTTGTCCGAAATGGGATACCAATTCACCCTAATGACTGCAGATATCGATGAGAAGAGCATCCGGAAAGAAACTCCAGAAGAATTAGTTATGGCCCTAGCTGAAGCCAAGGCAGAAGCCATCATACAAAGGCTCCCTGTTGATGACTATTTAAAGGATGCCCAGCCAACATTATTAATTACTTCTGACCAAGTGGTGGTCTATGAAGGTGTGGTTAGGGAAAAGCCATCTAGCAAAGAAGAAGCTCGGCAGTTCTTGAAAGATTATTCTGGAAGACATGCAGCAACTGTGGGATCTGTACTAGTAACAAATCTCAAAACAGGATTGAGAAAAGGAGACTCAGATCGTGTGGAGATTTATTTCAATGAAATACCAGATGAAATCATTGACAGGCTGGTTGATGAGGGAATTACTCTGAATGTTGCTGGGGGCCTGCTAATAGAGCATCCTTTAATACTGCCATTTGTCAAAGAAGTGGTAGGGACAACCGATAGTGTGATGGGGCTTCCCAAAAGCGGCGCCACCGCCGGAGCCAATCTCCACCGCCGCCAAAACGGCAGAATCATCCTCCCTGATTTCCTCCAGAGCGTGAACCTCAAGTACGTGAAATTAGGCTACCACTACCTCATCTCCAACCTCTTGACCCTATTCTTAGTCCCTTTGATCATCATCACATTGATCCAAGCCTCCCAAACCACCGAAATCGAACACCTCCACCATTTATGGCTCCACCTCCAGTACAATCTCATCACCATCCTCACCTGCTCCGCCTTCCTCGTCTTCGGCCTCACTCTCTACGCCGTCACGCGCCCACGCGCCGTCTACCTCGTTGATTTCGCCTGTTTCCGCCCCGCCGACCGCCTCAAGGCGCCCTTTAGCTCCTTCATGGAGCACTCCCGCCTCACGGGAGATTTTAGTGACTCCTCGCTCGAGTTCCAGCGCAAGATTTTCTTGCGCTCGGGACTCGGGGAGGAGACCTATGTGCCTGAGGCCATGCACCATATTCCTCCTCAGCCTTCTATGACCGCGGCTAGAGCTGAGGCCGAGGAGGTTATGTTTGGTGCTCTGGATAATCTCTTCCAGAGCACCAAAATCAAGCCGAAGGAAATTGGGATTCTTGTTGTGAATTGTAGTTTGTTTAACCCTACCCCTTCATTATCTGCCATGATTGTTAACAAGTATAAGTTGAGGGGTAACATTAGGAGCTTCAATCTGGGAGGTATGGGGTGCAGTGCTGGGGTTGTAGCTGTTGATCTTGCAAAGGACTTGCTGCAGGTTCATAGGAATACTTATGCTGTTGTTGTCAGCACTGAGAACATTACTCAAAATTGGTACTTTGGGAACAAGAAATCAATGCTTATCCCTAATTGCTTGTTCAGAGTTGGGTGTTCTGCTGTGCTTCTCTCTAACAAGTCCAGGGATAGGAAGAGGGCAAAGTATAGGCTTGTTCACGTGGTGAGGACTCATAAAGGGGCTGATGATAAGGCTTTCAGGTGTGTTTATCAGGAACAGGATGATGCTGGAAAAACTGGTGTTTCTTTGTCTAAAGATTTGATGGCAATCGCTGGTGGGGCACTCAAGACTGACATCACCACACTTGGCCCTCTGGTGCTCCCAATCAGTGAGCAGCTTCTGTTTTTCGCAACCTTGCTTGTGAGGAAGCTGTTCAAGGCTGATATGAAGCCTTACATACCGGATTTCAAGCTCGCTTTCGATCATTTCTGCATACATGCCGGCGGCAGGGCGGTGATTGATGAGCTGGAGAAGAATCTCCAGCTGCTTCCTGTCCATGTAGAGGCTTCTAGGATGACCCTTCACCGTTTCGGGAACACTTCTTCAAGCTCCATTTGGTATGAGTTGGCATATATAGAAGCCAAAGGGAGGGTGAGGAAGGGAAACAGGGTTTGGCAGATTGCATTTGGGAGTGGATTCAAGTGTAACAGTGCAGTGTGGGAGGCTCTGAGGAATGTGAGGTCATCCCCTAATGGACCCTGGGAAGATTGCATTGATAAGTATCCTGTGGAAATAGATAGTCACACTCACAGCACATAG 2112 0.483 MAAISSYKIILGSSSVARRKILSEMGYQFTLMTADIDEKSIRKETPEELVMALAEAKAEAIIQRLPVDDYLKDAQPTLLITSDQVVVYEGVVREKPSSKEEARQFLKDYSGRHAATVGSVLVTNLKTGLRKGDSDRVEIYFNEIPDEIIDRLVDEGITLNVAGGLLIEHPLILPFVKEVVGTTDSVMGLPKSGATAGANLHRRQNGRIILPDFLQSVNLKYVKLGYHYLISNLLTLFLVPLIIITLIQASQTTEIEHLHHLWLHLQYNLITILTCSAFLVFGLTLYAVTRPRAVYLVDFACFRPADRLKAPFSSFMEHSRLTGDFSDSSLEFQRKIFLRSGLGEETYVPEAMHHIPPQPSMTAARAEAEEVMFGALDNLFQSTKIKPKEIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVVAVDLAKDLLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKSRDRKRAKYRLVHVVRTHKGADDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGGALKTDITTLGPLVLPISEQLLFFATLLVRKLFKADMKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRVRKGNRVWQIAFGSGFKCNSAVWEALRNVRSSPNGPWEDCIDKYPVEIDSHTHST* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3243 703 CDD CHS_like 276 671 - -
Lja5g3243 703 SUPERFAMILY ITPase-like 6 191 IPR029001 -
Lja5g3243 703 Pfam Maf-like protein 8 192 IPR003697 GO:0047429
Lja5g3243 703 SUPERFAMILY Thiolase-like 502 674 IPR016039 GO:0016746
Lja5g3243 703 CDD Maf 9 190 IPR003697 GO:0047429
Lja5g3243 703 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 591 672 IPR013747 -
Lja5g3243 703 Gene3D - 2 195 IPR029001 -
Lja5g3243 703 PANTHER 3-KETOACYL-COA SYNTHASE 4 204 696 - -
Lja5g3243 703 Hamap dTTP/UTP pyrophosphatase. 8 203 IPR003697 GO:0047429
Lja5g3243 703 Gene3D - 319 673 IPR016039 GO:0016746
Lja5g3243 703 PANTHER 3-KETOACYL-COA SYNTHASE 204 696 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lja5g3243 703 Pfam FAE1/Type III polyketide synthase-like protein 286 575 IPR013601 GO:0006633|GO:0016020|GO:0016747
Lja5g3243 703 SUPERFAMILY Thiolase-like 280 497 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3243 Lja-Chr5 62751039 62760299 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3243 5 62751039 62760299 Lja5g3243 5 62751039 62760299 ECH