Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3240 ATGGCCATAGCTAGGCAAGCAAAACGCCCATGTGGGTTGTGGGTAAAGATGACAGCTGTGACCATATTGGGTCTCTGCTTCATCTTCGTCTGGACTGTGTTCTCTTCTTCTTCCACCAACGTCTCCATCCATAGGGAAAGCTTTGAGGACATTGCTGAACCCGTTTCCGCTTCTTCCAGGAATCAAGCTCAAAAACCCAAACCAGAAATCCATGAATCCTCATCACACAGTGTAAAAGATGAGAAAAGGGTTGATGGGTCTTCTTCCTCCACGCATCCTCCTCCTCATCATGAATCCAAGGCAAAGGAAAAGAAGAAAGGGGTGGCGCATGAGAAGAAAAGGTTGCATAAGGAAGATGAAGAGAAGCAGAATCAAGGGTCATCAAGTGATGAGCATGATCCCCAACCCCAACATCAGGAAGAGGAGGGTGAAGAAGAGGTGGAGTTGGAGGGTAAAGAAGAAGGTTTAGATCGTGAGAGTGAAGTGGGTGTGGATGGGGACACTGGTGGTGATGCTAGCAGCGATTTGGTTGAATCTGTGGATCAGGATTCTGAAGAGTTGGAAGATGGAAATGTGGAGGAGTTGAAAAAAGCAAGTAAGGGAAAGGTGAAGGGACCTTTGTTTGATCCAAATGCTAGCTACAAATGGAAATTGTGCAGCACCAGAAGCAAGCATAACTACATTCCCTGCATTGATATTGAAGCTGGTGGTGGAAAGGGGCAGGGTTACCGTCATAGAGAGAGGAGTTGCCCGAGGACACCCTTCATGTGTTTGGTTCCTCTTCCACATGCAGGGTATGGGTCTCCACTGCCATGGCCTGAGAGCAAATTGAAGATTTTGTATAAGAATGTTGCGCACCCGAAACTGGCTGCGTATATCAAAAGGCATAGTTGGTTGATGGAATCTGGAGAATTTCTTACTTTTCCCCAAAACCAGACTGAGTTCAAGGGAGGGGTTCGTCACTATCTTGAGTCCATTGAAGAGATGGTACCGGACATTGAGTGGGGTAAAAATATTCGTCTTGTCCTGGATATTGGATGTACAGATTCAAGCTTTGTGGCTACTCTCCTTGATAAGGAGGTTTTAACATTGTCACTAGGCTTGAAGGATGACCTAGTGGACTTAGCTCAGGTGGCACTTGAGCGTGGCTTCCCATCAGTGGTTAGCCCCTTTGGCAGAAGGAGGCTTCCTTTTCCAAGTTATGTTTTTGATGCTGTACATTGTGGGGGTTGCAGCATACCTTGGCATTCCAATGGGGGTAAGCTTCTATTAGAAATGAATCGTATTCTACGACCTGGTGGATACTTTATTATGTCAACTAAACATGACAGCTTCGAACAAGAAGAAGCCATGACCATGTTGACAGCATCTATTTGTTGGAACATTCTGGCACATAAAAGTGATGATGTCGGTGAAGTTGGAGTTAAAATATATCAAAAGCCTGAAGGAAATGACATCTATGAATTGAGGAGGAAGAAGATTCCACCACTTTGCAAAGAAAATGAAAATCCCGATGCGGTCTGGTATGTTCCAATGAAGACTTGTTTGCACATCATTCCAATTGGAATCGAACAACATGGAGCAGAGTGGCCTGAGGAATGGCCCAAGAGGCTTGAATCTTATCCTGATTGGGCAAACAATAAAGAGAAATTGGTGGCGGACACCCACCACTGGAATGCTATTGTTAACAAGTCATATCTCAATGGAATGGGCATTAACTGGACAAGCATCAGAAATGTAATGGACATGAAAGCCATCTATGGAGGATTGGCTGCTGCTCTCTCTCAACAACAGAAGGTCTGGGTGATGAATGTAGTCCCTGTTCACGCGCCGGATACACTTCCCATTATTTTTGAACGTGGGCTTGTTGGTGTCTCTCATGATTGGTGCGAGTCATTTGGAACTTACCCAAGATCGTATGACCTTCTGCATGTTGATCATTTGTTTTCACGGCTCAAAAACAGGTGCAAGCAACCTGTATCCATTGTTGTTGAGATGGACCGGATATTAAGACCTGGGGGTTGGACAATCATACGTGACAAGGTTGAAATTCTGAATGCATTGGAGGAAATACTGAGAAGCATGCAATGGGAGATCAGAATGTCATTCAACCAGGATAAGGAAGGGATTCTTTGTGCGCAGAAGACTCTGTGGAGGCCTTGA 2163 0.4512 MAIARQAKRPCGLWVKMTAVTILGLCFIFVWTVFSSSSTNVSIHRESFEDIAEPVSASSRNQAQKPKPEIHESSSHSVKDEKRVDGSSSSTHPPPHHESKAKEKKKGVAHEKKRLHKEDEEKQNQGSSSDEHDPQPQHQEEEGEEEVELEGKEEGLDRESEVGVDGDTGGDASSDLVESVDQDSEELEDGNVEELKKASKGKVKGPLFDPNASYKWKLCSTRSKHNYIPCIDIEAGGGKGQGYRHRERSCPRTPFMCLVPLPHAGYGSPLPWPESKLKILYKNVAHPKLAAYIKRHSWLMESGEFLTFPQNQTEFKGGVRHYLESIEEMVPDIEWGKNIRLVLDIGCTDSSFVATLLDKEVLTLSLGLKDDLVDLAQVALERGFPSVVSPFGRRRLPFPSYVFDAVHCGGCSIPWHSNGGKLLLEMNRILRPGGYFIMSTKHDSFEQEEAMTMLTASICWNILAHKSDDVGEVGVKIYQKPEGNDIYELRRKKIPPLCKENENPDAVWYVPMKTCLHIIPIGIEQHGAEWPEEWPKRLESYPDWANNKEKLVADTHHWNAIVNKSYLNGMGINWTSIRNVMDMKAIYGGLAAALSQQQKVWVMNVVPVHAPDTLPIIFERGLVGVSHDWCESFGTYPRSYDLLHVDHLFSRLKNRCKQPVSIVVEMDRILRPGGWTIIRDKVEILNALEEILRSMQWEIRMSFNQDKEGILCAQKTLWRP* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3240 720 MobiDBLite consensus disorder prediction 112 139 - -
Lja5g3240 720 Gene3D Vaccinia Virus protein VP39 314 490 IPR029063 -
Lja5g3240 720 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 513 706 IPR029063 -
Lja5g3240 720 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 7 720 IPR004159 GO:0008168
Lja5g3240 720 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 265 447 IPR029063 -
Lja5g3240 720 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 226 715 IPR004159 GO:0008168
Lja5g3240 720 MobiDBLite consensus disorder prediction 54 202 - -
Lja5g3240 720 MobiDBLite consensus disorder prediction 65 87 - -
Lja5g3240 720 CDD AdoMet_MTases 342 439 - -
Lja5g3240 720 PANTHER METHYLTRANSFERASE PMT28-RELATED 7 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3240 Lja-Chr5 62694170 62701092 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3240 5 62694170 62701092 Lja5g3240 5 62694170 62701092 ECH