Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3233 ATGGCAATCTTGGTCTCTTCCTCTAGAGTCCTTCTACCTATCCTGCCACTCTTTCTCGCATTCAATCTTGCAAATTCTGAACCGTTCATCGGCGTGAACTATGGCCAAGTCGCCGATAACCTACCACCGCCGTCAGCCACGGCGAAGCTTCTCCAGTCCACCGCCATCGGAAAGGTCCGGTTATACGGAACCGACCCGGCGATAATCAAGGCCCTAGCCAACACCGGGATCGGAATCGTGATCGGAGCAGCGAACGGCGACATTCCGGCGCTCGCCTCCGACCCGAACTTCGCGAAAACCTGGGTGAGCTCCAACGTCGCTCCCTACTACCCCGCCAGTAACATCATCCTCATCACCGTCGGCAACGAGGTGATAACCTCCAATGACACCGGCCTCGTGAACCAGATGCTGCCGGCGATACAGAACGTGCAAAACGCCCTCGACGCCGCTTCGTTTGGTGGTGGCAAAATCAAGGTCTCGACGGTGCATTCCATGGCGGTTTTGGGTAACTCTGAGCCTCCTTCTGGTGGGAAATTTCACGCTGAATACGACACCGTTTTGCAGGGGTTGTTGTCGTTTAACAATGCTACAGGGTCACCCTTTGCTATCAACCCTTACCCTTACTTTGCCTACAAGAGTGACCCTGGTAGACCTGATAACCTTGCGTTTTGCCTCTTCCAGCCCAACTCGGGCCGGGTTGACCCAAACACCAATCTCAATTACATGAACATGTTTGATGCTCAGGTGGATGCTGTGAGGTCTGCGTTGGATTCTCTGGGGTTTAAGAATGTTGAGATTGTGGTGGCCGAGACTGGGTGGCCTTACAAAGGAGACAACGACGAGGTTGGTCCTAGTCTTGAGAATGCTAAGGCTTACAACGGTAATCTGATTGCGCACCTTCGATCCAAGGTTGGAACCCCACTGATGCCAGGGAAATCAGTGGACACTTACCTCTTTGCTTTGTACGATGAGGACTTGAAGCCAGGACCTGCTTCTGAGAGAGCATTTGGGCTTTACAACCCTGATCAATCCATGATCTATGATGCTGGCCTCTCCAAGCAACAACAGCAGAGTAGTAGCCCTTCCCCTGTGGTTGCCCCGACTCCGGATGTGTCAAATTCTCCAGCGACTCAAACTCAAGTCCCAGTGGTGATCCCCCCGACTACTCCGGATGTGTCAAAATCTCCTGTGAATCCGACCCCAAGAGTTTCAAGTCCAACGAAACCAAATAATAGTGCAACATGGTGTGTGCCAAAAGCAGGAGTGGCAGATGCAGAGTTACAAGCAAATTTGGATTATGCTTGCGGACAGGGGATAGATTGTAGCTCAATCCAACCAGGAGGAGCTTGCTTTGAACCAAACGCATTAGTGAACCATGCTGCATATGCCATGAATCTCTTGTATCAAAAGTCTGGGCGGAATCCATTCAGTTGTGATTTCTCGCAAACTGCCACTCTATCAACATATAATCCAAGTTACAATAATTGCGTGTATGCCGGAGGAGCTGCCTAA 1512 0.5126 MAILVSSSRVLLPILPLFLAFNLANSEPFIGVNYGQVADNLPPPSATAKLLQSTAIGKVRLYGTDPAIIKALANTGIGIVIGAANGDIPALASDPNFAKTWVSSNVAPYYPASNIILITVGNEVITSNDTGLVNQMLPAIQNVQNALDAASFGGGKIKVSTVHSMAVLGNSEPPSGGKFHAEYDTVLQGLLSFNNATGSPFAINPYPYFAYKSDPGRPDNLAFCLFQPNSGRVDPNTNLNYMNMFDAQVDAVRSALDSLGFKNVEIVVAETGWPYKGDNDEVGPSLENAKAYNGNLIAHLRSKVGTPLMPGKSVDTYLFALYDEDLKPGPASERAFGLYNPDQSMIYDAGLSKQQQQSSSPSPVVAPTPDVSNSPATQTQVPVVIPPTTPDVSKSPVNPTPRVSSPTKPNNSATWCVPKAGVADAELQANLDYACGQGIDCSSIQPGGACFEPNALVNHAAYAMNLLYQKSGRNPFSCDFSQTATLSTYNPSYNNCVYAGGAA* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3233 503 MobiDBLite consensus disorder prediction 351 411 - -
Lja5g3233 503 PANTHER GLYCOSYL HYDROLASE FAMILY 17 PROTEIN 17 489 - -
Lja5g3233 503 Pfam Glycosyl hydrolases family 17 30 348 IPR000490 GO:0004553|GO:0005975
Lja5g3233 503 Gene3D - 409 499 - -
Lja5g3233 503 Gene3D Glycosidases 29 359 - -
Lja5g3233 503 Pfam X8 domain 414 485 IPR012946 -
Lja5g3233 503 SUPERFAMILY (Trans)glycosidases 30 349 IPR017853 -
Lja5g3233 503 MobiDBLite consensus disorder prediction 395 411 - -
Lja5g3233 503 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 17 489 IPR044965 GO:0004553|GO:0005975
Lja5g3233 503 MobiDBLite consensus disorder prediction 351 386 - -
Lja5g3233 503 SMART X8_cls 414 498 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3233 Lja-Chr5 62617218 62621402 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3233 5 62617218 62621402 Lja5g3233 5 62617218 62621402 ECH