Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3222 ATGGCTGGTCGTAGAGACGCCTTGCTCACCAGAGACAAATCCCAATCCGCCGCCGGATCTCGGATCGCCGCCGCCGTACTCATCGGCGTTCTCCTCGGCTGTATCTTAGCCTTCTTCCTACCCCACGGCTTCTTCACCTCCTCCACCACTCCCATCCTCAATCACAAGATGGTTTCTTCTGCGTGTGAATCGCCGGAACAACTTGATGCGTTGAAACTGGATATTGAGTCTGCCAAGGAGAAGAATTCTGAGCTGAAGAAGAAGGTTAGGGGGCTAATGGAGAAGCTGCGTATGGCGGAGCAAGGGAAGGGTCATGCTCAGGAGCAGGTTATTGTGCTGGGTGAGAATCACAAGGCTGGTCCTTATGGCACTGTCAAGGGTCTCAGAACAAACCCACCTGTGATTCCTGATGAATCAGTGAACCCCAGATTGGGTAAATTGTTGGAGGAGGTTGCTATTTATAAGGAGCTTCTTGTTGTTCTTGCTAACACTAATGTGATGGAGATGTTGGAGGTGTGGTTCACCAATATCAAGAGGGTTGGCATACCTAATTACTTGGTTGTTGCATTGGATGATAAAATTGAGGAGTTTTGCAAGGCAAATGATGTTCCTGTTTATAGGAGGGACCCGGATCAGGGTGTGGATTCGGTCGCAAAGACGGGCGGGAACCATGCTGTTTCCGGGTTGAAGTTTCGGATTTTGAGGGAGTTTCTGCAACTGGGTTACAGTGTTCTTCTGTCAGATGTTGATATTGTGTACTTGCAGAACCCCTTTGATTATCTTTATAGGGATTCGGATGTGGAGTCTATGTCGGATGGTCATGATAATAGGACAGCTTATGGTTTTAATGATGTCTTTGATGAGCCTTCAATGGGGTGGGCTAGATATGCTCATACCATGAGAATATGGGTTTATAACTCTGGTTTCTTTTACATAAGGCCTACTCTTCCTTCGATTGAGCTCTTGGATCGTGTTGCTAGCCGTCTTTCTACGGATTCAAAAGCGTGGGATCAGGCTGTTTTTAATGAAGAGCTGTTTTTCCCTTCACATCCGGGTTATGATGGACTTCATGCTGCAAAAAGGACAATGGATATGTACCTTTTTATGAACAGCAAGGTTCTCTTTAAGACTGTAAGGAAAGATGCTAAGCTCAAGAAGTTGAAGCCAGTGGTTGTACACCTTAACTACCATCCTAATAAATTTGATAGGATGAAGGCTGTAGTTGATTTCTATGTCAATGGGAAACAAGATGCGCTAGACAGTTTCCCTGATGGTTCTGATTGA 1284 0.4579 MAGRRDALLTRDKSQSAAGSRIAAAVLIGVLLGCILAFFLPHGFFTSSTTPILNHKMVSSACESPEQLDALKLDIESAKEKNSELKKKVRGLMEKLRMAEQGKGHAQEQVIVLGENHKAGPYGTVKGLRTNPPVIPDESVNPRLGKLLEEVAIYKELLVVLANTNVMEMLEVWFTNIKRVGIPNYLVVALDDKIEEFCKANDVPVYRRDPDQGVDSVAKTGGNHAVSGLKFRILREFLQLGYSVLLSDVDIVYLQNPFDYLYRDSDVESMSDGHDNRTAYGFNDVFDEPSMGWARYAHTMRIWVYNSGFFYIRPTLPSIELLDRVASRLSTDSKAWDQAVFNEELFFPSHPGYDGLHAAKRTMDMYLFMNSKVLFKTVRKDAKLKKLKPVVVHLNYHPNKFDRMKAVVDFYVNGKQDALDSFPDGSD* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3222 427 Pfam Nucleotide-diphospho-sugar transferase 182 404 IPR005069 -
Lja5g3222 427 SUPERFAMILY Nucleotide-diphospho-sugar transferases 159 394 IPR029044 -
Lja5g3222 427 PANTHER GLYCOSYLTRANSFERASE 1 427 - -
Lja5g3222 427 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Lja5g3222 427 PANTHER ARABINOSYLTRANSFERASE RRA3 1 427 IPR044290 GO:0016757|GO:0080147
Lja5g3222 427 Coils Coil 68 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3222 Lja-Chr5 62364764 62366558 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3222 5 62364764 62366558 Lja5g3222 5 62364764 62366558 ECH