Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3211 ATGGAAGTTTGCAAGCCTCTCAAATCTGATAGTACATTAAAGCACCGCCCTTTGACCCCTCTTAGGATTTTAAGGGGTTTGATATGCTTAGTGGTGTTTCTTTCTACAGCTTTTATATGTTTAGTCTATTTGTCACCACTGGCAGTTCTAGGATTGCAGCTAATCAGTACACGTTTTAGTAGGAAGGCAGTGTCATTCTTCTTTGGACTTTGGCTATCTTTATGGCCTTTTCTGTTTGAAACGGTAAACAGAACTAGAGTTGTCTTTTCCGGGGATAGCGTTCCGATGAAAGAACGTGTTTTACTCATTGCTAATCACAGAACTGAGGTTGATTGGATGTACTTGTGGAGTCTTGCAATTCGAAAGGGTAGACTGGGATACATAAAGTACATCCTTAAGAGCAGCTTGATGAAACTGCCTATCTTTGGTTGGGGATTTCACATTCTGGAATTCATTGCTGTGGAGAGGAAGTGGGAGATAGATGAGCAAATAATGCAGCAAAAGCTATCAACATTTAAGGATCCCCAAGATCCTTTATGGCTAGCAATTTTTCCTGAAGGAACAGATTATACTGAACAGAAGTGTAAAAGTAGTCAAAAATTTGCTGCTGAAGTTGGTCTCCCTGTTCTAACAAATGTATTACTTCCAAAAACAAAAGGTTTCCATGCTTGCCTGGAAGCTCTACGAGGCTCATTGGATGCAGTATATGATGTGACAATTGCATACAAGAATCAGTGTCCTTCCTTTCTGGACAATGTTTTTGGGGTTGATCCTTCAGAAGTACACCTGCATATTCGGCGTATTCCTGTAGAGGAGATTCCAGCCTCTGAAGCCAAAGCTGATTCTTGGCTAATGAATACATTCGAGATCAAGGACCAATTGCTTTCTGATTTCAAGGTTGAAGGCCATTTCCCTAACCAAGTAAATGACAAGGAACTTTCTACATTCAAGGGCCTACTCACTTTTACTATGGTAGTTGGTTTTACTGCCATGTTTACTTACTTCACTTTTTTTTCTCTCATTTGGTTCAAGTTGTATGTAGGCCTATCTTGTGCCTATCTTTCTATTGCAACAAACTACAAATTTCAAATGATGCCTTTAACAAATTATGTTCATGCACTCTATAACAGCAAGAAACAAGAGTGA 1146 0.3944 MEVCKPLKSDSTLKHRPLTPLRILRGLICLVVFLSTAFICLVYLSPLAVLGLQLISTRFSRKAVSFFFGLWLSLWPFLFETVNRTRVVFSGDSVPMKERVLLIANHRTEVDWMYLWSLAIRKGRLGYIKYILKSSLMKLPIFGWGFHILEFIAVERKWEIDEQIMQQKLSTFKDPQDPLWLAIFPEGTDYTEQKCKSSQKFAAEVGLPVLTNVLLPKTKGFHACLEALRGSLDAVYDVTIAYKNQCPSFLDNVFGVDPSEVHLHIRRIPVEEIPASEAKADSWLMNTFEIKDQLLSDFKVEGHFPNQVNDKELSTFKGLLTFTMVVGFTAMFTYFTFFSLIWFKLYVGLSCAYLSIATNYKFQMMPLTNYVHALYNSKKQE* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3211 381 CDD LPLAT_LCLAT1-like 76 266 - -
Lja5g3211 381 Pfam Acyltransferase 89 243 IPR002123 GO:0016746
Lja5g3211 381 PANTHER LYSOPHOSPHATIDYL ACYLTRANSFERASE 5-RELATED 1 379 - -
Lja5g3211 381 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 1 379 - -
Lja5g3211 381 SMART plsc_2 100 222 IPR002123 GO:0016746
Lja5g3211 381 Pfam Acyltransferase C-terminus 254 323 IPR032098 -
Lja5g3211 381 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 42 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3211 Lja-Chr5 62184129 62188030 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3211 5 62184129 62188030 Lja2g0329 2 2965004 2969663 ECH
Lja5g3211 5 62184129 62188030 Lja4g0702 4 5807860 5809822 ECH
Lja5g3211 5 62184129 62188030 Lja5g3211 5 62184129 62188030 ECH