Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3208 ATGAAATCCAAGCTAAAACCAGAACCTCCACAACTCTTATCCTTTTTTCTCATCCTCTACTTGTTCTTGCTACCATGTTCATCCTCCTCCACCAACAATGCCCCAAACACCATCACCCACCAATTCAAAGAAGCCCCTCAATTCTACAACTCTCCAAACTGCCCCTCCATCAACAACAACAACAACATGGACAGAGCTCTCTGTTATGAGGACTCTGTTCATGTTGCAATGACTCTGGACACAACCTACATAAGAGGATCCATGGCAGCAATCCTCTCAGTCCTGCAACACTCTTCATGCCCCCAAAACATCTTCTTCCACTTTGTTTATTCCTCTAACAAACCCCTCCTTCACTCCACCATTGCAAATTCCTTCCCTTACCTCAAATTCCAAGTCTACAGCTTCGATGACTCCATCGTTTCAGGCCTCATCTCCACCTCCATTCGCTCCGCACTTGATTGCCCTCTCAACTACGCAAGAAGCTACCTAGCAAACCTTCTTCCCCTCTGTGTACAGCGCGTGGTGTACTTGGACTCTGATCTGATCTTGGTTGATGACATAACAAAACTTTCAGAAACCCCATTAGGAAAAAACTCTGTTTTGGCAGCTCCTGAATACTGCAATGCTAATTTCACCTCTTACTTCACTCCATCTTTCTGGTCCAACCCTTCTCTTTCTCTCACTTTTGCTGACAGAAAACCTTGCTACTTCAACACCGGGGTGATGGTGATTGATCTGGCGCGGTGGCGCGAGGGCGATTACACAACAAAGATTGAGGAGTGGATGGAGCTGCAGAAGAGGATGAGGATCTATGAGCTCGGTTCATTGCCGCCGTTCTTGCTAGTCTTTGCCGGGAACATTGTTCCTGTGGATCACAGGTGGAACCAGCACGGTTTAGGAGGTGACAATTTCCGTGGTCTTTGTAGAGAACTTCATCCTGGTCCAGTGAGCTTGTTGCATTGGAGTGGGAAGGGTAAACCATGGGTTCGATTGGATGCTAATAGGCCTTGTCCATTGGATGCACTTTGGGCACCTTATGATCTTTTGAAGACCCCATTTTCTTTAGATTCTTGA 1074 0.4665 MKSKLKPEPPQLLSFFLILYLFLLPCSSSSTNNAPNTITHQFKEAPQFYNSPNCPSINNNNNMDRALCYEDSVHVAMTLDTTYIRGSMAAILSVLQHSSCPQNIFFHFVYSSNKPLLHSTIANSFPYLKFQVYSFDDSIVSGLISTSIRSALDCPLNYARSYLANLLPLCVQRVVYLDSDLILVDDITKLSETPLGKNSVLAAPEYCNANFTSYFTPSFWSNPSLSLTFADRKPCYFNTGVMVIDLARWREGDYTTKIEEWMELQKRMRIYELGSLPPFLLVFAGNIVPVDHRWNQHGLGGDNFRGLCRELHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLKTPFSLDS* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3208 357 PANTHER HEXOSYLTRANSFERASE 17 357 - -
Lja5g3208 357 SUPERFAMILY Nucleotide-diphospho-sugar transferases 73 349 IPR029044 -
Lja5g3208 357 Pfam Glycosyl transferase family 8 74 330 IPR002495 GO:0016757
Lja5g3208 357 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 74 337 IPR029044 -
Lja5g3208 357 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 17 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3208 Lja-Chr5 62145359 62147342 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3208 5 62145359 62147342 Lja5g3208 5 62145359 62147342 ECH
Lja5g3208 5 62145359 62147342 Lja1g3613 1 44837131 44839142 PCT