Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3202 ATGGCGGTTTCGCTATCCACTCTCACTGCAACACTCTCTTCACTCTCCTTCTCCTCCAACATTTCTCACAACCCACAAACCCTTACCTATGCCAGAACCACCCAACCCCTTTCCCTCTCGCGCGTCCCCAAAACCCCCTCCCTCACCGTCTCCGCCGCTGCTCCGGTGGAGCCCGAAACCGAAAACCTCATGAAGTACGTCAAATCCAGGCTTCCTGGTGGATTCGCTGCTCAAACTACCATCGGCACTGGTCGCCGGAAGAGCGCCATCGCTCGCGTTGTTCTCCAGGAAGGTACCGGCAAGTTCATCATCAATTACCGTGACGCCAAGGAATATCTTCAGGGAAATCCGTTGTGGCTTCAGTACATTAAGGTACCCTTGGTAACTCTGGGATATGAAACTAGTTATGATGTGTTTGTCAAAGCTGAGGGTGGTGGCCTCTCTGGTCAGGCTCAGGCAATTTCCCTTGGCATTGCTCGAGCCTTGCTAAAGGTAAGCGAAGATCATAGAGTACCTTTGAGACAGGAAGGGCTTCTAACCAGAGATTCTAGAGTGGTTGAGAGGAAGAAAGCTGGTCTCAAGAAAGCTCGTAAAGCCCCTCAGTTTTCCAAACGTTGA 618 0.5162 MAVSLSTLTATLSSLSFSSNISHNPQTLTYARTTQPLSLSRVPKTPSLTVSAAAPVEPETENLMKYVKSRLPGGFAAQTTIGTGRRKSAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAEGGGLSGQAQAISLGIARALLKVSEDHRVPLRQEGLLTRDSRVVERKKAGLKKARKAPQFSKR* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3202 205 Gene3D - 71 205 IPR014721 -
Lja5g3202 205 PANTHER RIBOSOMAL PROTEIN S9 61 205 IPR000754 GO:0003735|GO:0005840|GO:0006412
Lja5g3202 205 PANTHER 28S RIBOSOMAL PROTEIN S9, MITOCHONDRIAL 61 205 - -
Lja5g3202 205 Hamap 30S ribosomal protein S9 [rpsI]. 75 205 IPR023035 -
Lja5g3202 205 ProSitePatterns Ribosomal protein S9 signature. 144 162 IPR020574 GO:0003735|GO:0005840|GO:0006412
Lja5g3202 205 SUPERFAMILY Ribosomal protein S5 domain 2-like 80 205 IPR020568 -
Lja5g3202 205 Pfam Ribosomal protein S9/S16 84 205 IPR000754 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3202 Lja-Chr5 62088678 62090682 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3202 5 62088678 62090682 Lja5g3202 5 62088678 62090682 ECH