Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3201 ATGTTCCACAACAACAATAGCCTCAGCGTCTCGATCCCCGTCTCCGACGACGAACCCGATGAACTGGGTCGGATGCGTGTGCGCGCGCGGCGGAAACGGAAGAAACTCACCCACCGTCGGTTCCTCCGGAAGCTTCTTGTCAGATACTGGATGCTACTCATCATCATCCCCACCGCGTGTTTGCTCTTCTTCGAGGCCTCCAGAATCGCTCGGAAGCCTAGTTTCAATGTCAACTCCGATATACAAACACGCACGCCAGTTGATCGATCTAGTCCCCCATTGAGGAAGGAGACACACAGCAACCTCAATCGCCTTGATCCTACTACCCATGTTGTTGCTGGTGTCAGAGAACGTTGTTTGAAGCTCCTGCCACCTGAAAAACTTGATCAACTGGATATTCCGGTGGAAGAAGAATCTAGATTGCCTGTTGGTAAAGTTCTATACATGTCAGAGAGTGATCTGTCTATTCCGGGAGGGAATGCTACATTGTCTCAACTGCGTGCTGAAGACACAAGATTTAATTTATTTACTGGAAATCAAACGTTTGAGCAGAGAGATCGAAGTTTTGAGGTGAAAGAAACAATGATGGTACATTGTGGGTTCTACAGTGAGAATGGAGGGTTTAAGATATCTGATGAAGATCGAAGTTACATGCAAGAATGCAAAGTTGCGGTATCTACTTGTGCGTTTGGTGGCGGTGATGATCTCTATCAACCAATTGGAATGTCTGAGGCTTCGCTGAAGAAGGTTTGCTATGTAGCATTCTGGGATGAAATCACCCAAAAAGCGCAGGAATTAGTGGAGCGCAGAATTGGCGAAGATGGATTTATTGGAAAATGGCGTGTTGTTGTCGTCCGGGATCTTCCTTTTGCTGATCAAAGGCTGAATGGTAAAATCCCCAAGATGTTAAGCCATCGTCTTTTTCCTCAAGCAAAATACTCTATTTGGGTAGACTCCAAGTCCCAATTTCGGAGGGATCCATTAGGTGTGCTAGAAGCACTCATTTGGCGCACAGATTCTATACTGGCCATATCAGAACATGGAGCTCGTAGTAGTGTCTATGATGAGTCCAAGGCTGTTGTCAAGAAAAACAAAGCCAAGCCGGAGGAAGTTGAAGTGCAACTGAATCAATACAGAAAAGATGGCTTGCCTGAAGACAAGAGATTTAATGGAAAGAAAGCTCTATGTGAAGCCTCTGTTATCGTGAGGAAGCATACACCAATAACTAATCTATTGATGTGCACCTGGTTCAATGAGGTGGTTCGCTTCACTTCTAGGGATCAGCTCAGCTTCCCATATGTCTTGTGGCGTCTGAACGCATTCAAAAGCATCAATATGTTCCCTGTCTGCACCCGCAAGGATCTTGTCAATAGCATGGGCCATATCCGAAAGGCCAAACCACTGCAAAGCTGA 1413 0.4607 MFHNNNSLSVSIPVSDDEPDELGRMRVRARRKRKKLTHRRFLRKLLVRYWMLLIIIPTACLLFFEASRIARKPSFNVNSDIQTRTPVDRSSPPLRKETHSNLNRLDPTTHVVAGVRERCLKLLPPEKLDQLDIPVEEESRLPVGKVLYMSESDLSIPGGNATLSQLRAEDTRFNLFTGNQTFEQRDRSFEVKETMMVHCGFYSENGGFKISDEDRSYMQECKVAVSTCAFGGGDDLYQPIGMSEASLKKVCYVAFWDEITQKAQELVERRIGEDGFIGKWRVVVVRDLPFADQRLNGKIPKMLSHRLFPQAKYSIWVDSKSQFRRDPLGVLEALIWRTDSILAISEHGARSSVYDESKAVVKKNKAKPEEVEVQLNQYRKDGLPEDKRFNGKKALCEASVIVRKHTPITNLLMCTWFNEVVRFTSRDQLSFPYVLWRLNAFKSINMFPVCTRKDLVNSMGHIRKAKPLQS* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3201 470 PANTHER OS01G0749100 PROTEIN 7 468 - -
Lja5g3201 470 MobiDBLite consensus disorder prediction 80 101 - -
Lja5g3201 470 Pfam Protein of unknown function (DUF616) 168 461 IPR006852 -
Lja5g3201 470 PANTHER ALKALINE CERAMIDASE-RELATED 7 468 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3201 Lja-Chr5 62081176 62084837 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3201 5 62081176 62084837 Lja5g3201 5 62081176 62084837 ECH