Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3196 ATGATGGCATCTTCTACTATCCCCTCTTCTTCCTCTTCCTGTTTCCATCAACTACAATTTCCATCATCAACAAGAAAACCCACCAAACCTTTCTCTGTTTCCCCCATCAGAGCCTCTGTTTCAGAAAAACCCTCATCGATCTCAGTCCCATCAGTGTCTGTGTCGTCGCCGGAGCCCACCAAGCTTCCGATCCGCAAGATCCCCGGCGACCATGGCATCCCCTTGATCGGCCCCTACAAGGACCGCGTCGACTACTTCTACAACCAGGGCCGCGACGAGTTCTTCAAGAAACGAATCCAAAAGTACCAGTCAACGGTGTTCCGCACCAACGTCCCACCAGGTCCCCTCATCGCCAAGAACCCAAACGTCGTCGTCCTCCTCGACGGAAAAAGCTTCCCCACCCTCTTCGACACCGAGAAAGTCGACAAAACCGACGTCTTCACCGGCACCTTCATGCCCTCCACCGAGCTCACCGGCGGCTACAGAGTCCTCTCCTACCTCGACCCGTCGGAGCCCAAACACGCCCAGCTCAAACGCCTCATGTTCTTCCTCTTGAAATCCCGCCGCGAACACGTCATTCCGGAGTTCCACATCGCCTTCACCGAGCTCTTCGAAAGTCTTGAAAAGGAGCTTTCGAAGAACGGTAAAGTCAGCTTCGGTGAAGCGAACGACCAGGCCGCGTTCAATTTCTTGGCCAGGTCACTCTTCGGAGCGAACCCGGCTGAGACTGAACTCGACCTGGACGGGCCGAAGCTGATACAGAAATGGATTCTGTTTCAGCTCAGCCCGGTTCTCAAATTAGGCCTCCCTAGCCTCATTGAGGATCAAATCCTCCGCAATTTCCGCCTCCCTGCTTCAATCATCAAGAAAGACTACCAACGACTCTACAACTTCTTCTACCAGAGCTCGGGCTTCATCTTCGACGAAGCCGAGCGACTAGGCGTTTCAAGAGAAGAAGCTTGCCACAACCTCCTCTTCGCCACCTGCTTCAATTCGTTGGGTGGAATGAAGCTGTTCTTCCCCAACGTTCTGAAGTGGATCGGAAGAGGAGGGGTCAAGCTTCACTCGGACCTCGCAACAGAGGTCCGGACCGCCGTGAGATCAGCCGGCGGGAAGGTGACAATGGCGGCGATGGAGAATATGCCGTTGATGAAGTCCGTGGTGTACGAAGCCTTCCGTGTTGACCCGCCGGTGCCGTTGCAATTCGGGCGGGTGAGAAAGGACATGGTGATTGAGAGCCATGATCACGCGTTTCGCGTGAAGAAAGGGGAGATGCTGTTCGGGTACCAACCGTTTGCGACGAAGGATCCGAAGATATTTGAGCGGGCGGAGGAGTTCGTCGGAGATAGGTTCATGGGGGCGGAGGGGGAGAAGCTGCTGAAACATGTACTGTGGTCGAATGGGCCGGAGACGGCAACTCCGACGGTGAACGACAAGCAGTGTGCTGGGAAGGATTTTGTGACACTGGTTTCGAGGTTGTTGGTGGTGGAGTTGTTTCTTCGTTACGATTCGTTTGAGATTCAAGTGGGAACTTCACCGTTGGGTTCTGCTGTTACTCTCACTTCATTGAAGAGAGCAAGCTTTTAA 1587 0.5413 MMASSTIPSSSSSCFHQLQFPSSTRKPTKPFSVSPIRASVSEKPSSISVPSVSVSSPEPTKLPIRKIPGDHGIPLIGPYKDRVDYFYNQGRDEFFKKRIQKYQSTVFRTNVPPGPLIAKNPNVVVLLDGKSFPTLFDTEKVDKTDVFTGTFMPSTELTGGYRVLSYLDPSEPKHAQLKRLMFFLLKSRREHVIPEFHIAFTELFESLEKELSKNGKVSFGEANDQAAFNFLARSLFGANPAETELDLDGPKLIQKWILFQLSPVLKLGLPSLIEDQILRNFRLPASIIKKDYQRLYNFFYQSSGFIFDEAERLGVSREEACHNLLFATCFNSLGGMKLFFPNVLKWIGRGGVKLHSDLATEVRTAVRSAGGKVTMAAMENMPLMKSVVYEAFRVDPPVPLQFGRVRKDMVIESHDHAFRVKKGEMLFGYQPFATKDPKIFERAEEFVGDRFMGAEGEKLLKHVLWSNGPETATPTVNDKQCAGKDFVTLVSRLLVVELFLRYDSFEIQVGTSPLGSAVTLTSLKRASF* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3196 528 PANTHER ALLENE OXIDE SYNTHASE 1, CHLOROPLASTIC-LIKE 45 526 - -
Lja5g3196 528 SUPERFAMILY Cytochrome P450 63 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3196 528 PRINTS E-class P450 group IV signature 381 397 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3196 528 PRINTS E-class P450 group IV signature 434 452 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3196 528 PRINTS E-class P450 group IV signature 481 499 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3196 528 Gene3D Cytochrome P450 62 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3196 528 MobiDBLite consensus disorder prediction 1 58 - -
Lja5g3196 528 Pfam Cytochrome P450 358 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3196 528 PANTHER CYTOCHROME P450 26 45 526 - -
Lja5g3196 528 MobiDBLite consensus disorder prediction 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3196 Lja-Chr5 61984303 61986520 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3196 5 61984303 61986520 Lja5g3196 5 61984303 61986520 ECH