LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja5g3192	ATGCTAAGAGGCGAAACCGTTGGTTCAGTCAGCGCGAGGCGGCACACCACCGCCCCTACGGCGTCGAATAAGGTTCTCGTCGCTGTGAAGGCGGAGAAGGTGATCTCCAACACCGCATTAGCCTGGGCGCTCACTCATGTCGTTCACTCCACCGATACCATCACGCTACTCGCCGTTTACTCTGCCGAGAACACCGGCAGAAGATTCTGGAACTTCTCGAGATTCGCCGGAGACTGTGGGAGCGGACGCGCGGGAAAATTGCCGGAGAGGATTTCCGATATCTCCCAATCTTGTGCTCAGATGGTGCTTCAGTTGCACAATCACATTGAGGTTCGGGTGAAAATTAAGGTGGTGACGAGTACTCCTAGTGGTGCTGTGGCAGCTGAAGCCAGATGGAGTGGTTCCCATTGGGTCATACTGGACAAGAAATTAAAGCAAGAGGCAAAGCATTGCATGGATGAACTCAGCTGCAGCATTGTGGTGATGAACGGCTCACAGCCAAAAGTCCTCAGGCTTAACTTAGGATCCTCCGAAGAACTCCAAACTCCATTTTTCTCTTATTCTTCACCAGGCATAGAAATTGGGAAACTAAAAGGCCGCAGATTGATGCATTCCACCCCAGTGAGTAGCCCTGAAGACACAGAAGAAGCAGGTACTTCAATGTCAAGCACTGACTCAGCCACTTCTCCTTTCCTCGTCTACAAACAAAATCCTCTGTACCAAGGCCAGGGACCACATGAAAGAACAAACAAACCATTGAACAACCCAAAAGGTTTCAATGCACAGCCACCATTATACTTTGATTTGGAAAGGGATCACCCAACATCACCTGTGGCTAGAGACATAAATACTGTATTTTGGATTTGGAAAGGGATCACCCAAAACCACAATGCAAATGAGAAGCTTCGAAACGCTGAAAACAAAGTTATCCAAAGAACTAAGTCTCCAACTTCCAAAACTCTACTTGAGAATTTCAAGCATTGTGATCAAGAGACAACAGAAAGTGAACTCGGATTTAAGTTTAACCAAACTCAAAGTAGAAGCTATATCCCGAACTCGAGCATCAGAGAAAACTCCATTCCTTTGGGTAGAACTACCTCTATACCTCCTCCTTTATGCTCTCAGTGTCAGAATAAAGCACCAGTATTCGGAAAGCCTCCTAGACGTTTTTCCTTCAAAGAGATAGAGGAAGCTACTGACATGTTCTCAGAAATGAATTTATTGGCTGAAGGTGGATTCGGTGTGGTTCATAAGGGAATACTCAAAGATGGTCAGATCGTTGCGGTGAAACAGTTAAAGCTCAGTGGCTCTCAAGCAGATATTGATTTCTGCAGGGAAGTTAGGCTTTTGAGCTGTGCTCAACACAGAAATGTTGTGTTGTTGATAGGATTTTGCACAGAGGACAATTTGAGGATATTAGTGTATGAGTACATATGTAATGGTTCCTTGGACCTCTGCTTACATGGAGGCGAGAATATGTCGTTGGATTGGAACTCACGCTTAAAGATAGCGATTGGAGTGGCGCGAGGCTTACGCTACCTCCATGAAGATTGTAGAGTTGGTTGTATAGTGCACAGAGACCTTCGACCCAAAAATATCCTCTTAACTCATGACTTTGAACCTCTGGTGGCTGATTTTGGGCTTGCTAGATGGCATTCAGAATGGAATATGAATACTGAAGATCGCGTTATAGGAACTTCAGGGTACCTTGCACCTGAGTATATTGATGCTGGAAACGTTACATATAAAATAGATGTATATGCATTTGGAATTGTTTTGTTAGAGCTAATAACCGGTCGAAGAATTAGTGAATTGGAACAGATTAATGGACACTCGTATCTTTCTGAATTGTTTCACCCCATACACATGTTGGAGCCGGATCATATCTTACAAAACGTTCTATCTCTCAAACCATGCTTGGATTCTGAGGCGTCACTGCAGTTTAATCTTCAATTGCAAGCCATGGCAAGAGCTGTTTCATTGTGTCTGCGTCTGGATCCTGATGCCAGACCCTCCATGTCAAAGATACTCAGAGTGCTGGAAGGGGGTGATCCTACAGGTCCTATGAGCTTAGATATCAATTCAGTTGGTAATACAAGTGGCCATTTAAGTGGTTTGACTTGGCAAACTCCACCCAAATGTACAGTAAGTCATTCTCGTCACCTATCACATTGA	2175	0.4474	MLRGETVGSVSARRHTTAPTASNKVLVAVKAEKVISNTALAWALTHVVHSTDTITLLAVYSAENTGRRFWNFSRFAGDCGSGRAGKLPERISDISQSCAQMVLQLHNHIEVRVKIKVVTSTPSGAVAAEARWSGSHWVILDKKLKQEAKHCMDELSCSIVVMNGSQPKVLRLNLGSSEELQTPFFSYSSPGIEIGKLKGRRLMHSTPVSSPEDTEEAGTSMSSTDSATSPFLVYKQNPLYQGQGPHERTNKPLNNPKGFNAQPPLYFDLERDHPTSPVARDINTVFWIWKGITQNHNANEKLRNAENKVIQRTKSPTSKTLLENFKHCDQETTESELGFKFNQTQSRSYIPNSSIRENSIPLGRTTSIPPPLCSQCQNKAPVFGKPPRRFSFKEIEEATDMFSEMNLLAEGGFGVVHKGILKDGQIVAVKQLKLSGSQADIDFCREVRLLSCAQHRNVVLLIGFCTEDNLRILVYEYICNGSLDLCLHGGENMSLDWNSRLKIAIGVARGLRYLHEDCRVGCIVHRDLRPKNILLTHDFEPLVADFGLARWHSEWNMNTEDRVIGTSGYLAPEYIDAGNVTYKIDVYAFGIVLLELITGRRISELEQINGHSYLSELFHPIHMLEPDHILQNVLSLKPCLDSEASLQFNLQLQAMARAVSLCLRLDPDARPSMSKILRVLEGGDPTGPMSLDINSVGNTSGHLSGLTWQTPPKCTVSHSRHLSH*	725

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja5g3192	724	PANTHER	OS01G0253100 PROTEIN	19	714	IPR045271	GO:0004714\|GO:0006468
	Lja5g3192	724	MobiDBLite	consensus disorder prediction	238	257	-	-
	Lja5g3192	724	SMART	tyrkin_6	402	680	IPR020635	GO:0004713\|GO:0006468
	Lja5g3192	724	ProSiteProfiles	Protein kinase domain profile.	402	687	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lja5g3192	724	Gene3D	Phosphorylase Kinase; domain 1	371	477	-	-
	Lja5g3192	724	MobiDBLite	consensus disorder prediction	207	228	-	-
	Lja5g3192	724	Gene3D	Transferase(Phosphotransferase) domain 1	478	686	-	-
	Lja5g3192	724	PANTHER	ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE	19	714	-	-
	Lja5g3192	724	Pfam	Protein kinase domain	404	678	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lja5g3192	724	MobiDBLite	consensus disorder prediction	204	228	-	-
	Lja5g3192	724	ProSitePatterns	Tyrosine protein kinases specific active-site signature.	523	535	IPR008266	GO:0004672\|GO:0006468
	Lja5g3192	724	SUPERFAMILY	Protein kinase-like (PK-like)	382	680	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja5g3192	Lja-Chr5	61939938	61945769	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-2	Lja5g3192		Pkinase	1.4e-44	CL0016

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja5g3192	5	61939938	61945769	Lja5g3192	5	61939938	61945769	ECH