Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3183 ATGGGTCATGAGACTGATAACCACCACCACCATGCTCCGCCGCCAGTTCAGGCTCCACCGCCAGGTCCACCACCACCGAACTTTGGACTTTCCAGGGGACCCACTTGGGCTCCTGCTGAACAACTCCTGCAGCTGGATTACTGCATCCACTCCAATCCTTCATGGCCGGAAGCACTGCTACTGGGTTTTCAGCACTACATTGTGATGCTTGGAACAACTGTTCTGATTGCTACCTCCCTGGTGAATCAGATGGGTGGGACTCATGGTGACAAAGCTCGTGTGATTCAGACTATGTTGTTCATGTCTGCCATCAACACTCTGCTCCAGACTTGGTTCGGGTCGAGGCTTCCAACTGTGATGGGTGGATCGGTTGCTTACATTCTTCCTGTGATGTCGGTCATAAATGATTATACTGACAAGACGTTCTCATCTGAGCATGAGAGGTTTACCTACACAATCAGAACAGTTCAAGGATCCCTGATTGTATCTTCTTTCGTCAATATCTTCCTTGGGTATAGCAGGGTATGGGGGAATTTAGTAAGGTTGTTTAGTCCCATAGTCATTGTTCCTGTAGTATGTCTGGTGGGTCTTGGCGCGTTCATGAGAGGCTTTCCATTGCTTGCGGATTGCGTGCAGATTGGACTACCTATGCTCATTTTTCTGGTTTTAATGCAACAGTATCTGAAGAAGATTCATCCTAAAACTCATAATGTACTTGAGAGGTATTCTATTCTTCTTTGCGCCGCTCTCATCTGGGCTTTCGCTGCTATCCTTACTGTGGCCGGTGCATACAACAATTCCAAAACAAAAACCCAGTCGAGTTGTCGCACGGATCGCTCATTCCTGATGTCTTCTGCTCCTTGGGTTAAAGTTCCATACCCATTTCAATGGGGTACCCCCATATTCAGTGCTGGTCATGTCTTTGGGATGATGGGAGCAGCACTTGTCTCTTCTGCTGAGTCTACTGGTACATACTTTGCTGCCGCAAGGCTTTCGGGTTCAACACCCCCTCCTCCACATGTGATCAGCCGAAGTATCGGGTTGCAGGGCCTTGGCATGCTAATTGAAGGCATTTTTGGTTCCGTTGTTGGTACTACTGCATCTGTTGAAAATGTTGGCCTACTTGGTCTAACTCATATAGGGAGCAGAAGAGTGGTGCAAATATCATGTGGCTTCATGTTCTTCTTCTCTATTTTTGGAAAATTTGGAGCCTTTTTCGCCTCGATTCCCCTGTCAATATTTGCTGCTATATACTGTGTTCTATTTGGTATTGTGGCTGCTATTGGGATTTCATTCATACAGTTTTCAAATAACAATTCCATGAGAAATATTTATATTCTTGGCTTATCCTTGTTTCTTGGAATCTCAATCCCACAATATTTCATCATGAACATTTCACCAGATGGCCGTGGTCCAGTTAGAACAAATGGTAGATGGTTTAATGACATTTTGAATACCATATTCTCTTCTCCCCCAACTGTGGCCATAATCGTTGGGACTGTTCTTGACAACACACTGGATGTCAAACACAAAGAGGACGACAGAGGACTTACATGGTGGCGTCCTTTCCAGCATAGGAAGGGAGATGTTAGAAATGATGAGTTTTATCGCTTTCCTCTAGGATTAACTGAATATATTCCTTCAAGGTTCCGGCCATGA 1659 0.4533 MGHETDNHHHHAPPPVQAPPPGPPPPNFGLSRGPTWAPAEQLLQLDYCIHSNPSWPEALLLGFQHYIVMLGTTVLIATSLVNQMGGTHGDKARVIQTMLFMSAINTLLQTWFGSRLPTVMGGSVAYILPVMSVINDYTDKTFSSEHERFTYTIRTVQGSLIVSSFVNIFLGYSRVWGNLVRLFSPIVIVPVVCLVGLGAFMRGFPLLADCVQIGLPMLIFLVLMQQYLKKIHPKTHNVLERYSILLCAALIWAFAAILTVAGAYNNSKTKTQSSCRTDRSFLMSSAPWVKVPYPFQWGTPIFSAGHVFGMMGAALVSSAESTGTYFAAARLSGSTPPPPHVISRSIGLQGLGMLIEGIFGSVVGTTASVENVGLLGLTHIGSRRVVQISCGFMFFFSIFGKFGAFFASIPLSIFAAIYCVLFGIVAAIGISFIQFSNNNSMRNIYILGLSLFLGISIPQYFIMNISPDGRGPVRTNGRWFNDILNTIFSSPPTVAIIVGTVLDNTLDVKHKEDDRGLTWWRPFQHRKGDVRNDEFYRFPLGLTEYIPSRFRP* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3183 552 Pfam Permease family 58 461 IPR006043 GO:0016020|GO:0022857|GO:0055085
Lja5g3183 552 MobiDBLite consensus disorder prediction 13 31 - -
Lja5g3183 552 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 9 549 - -
Lja5g3183 552 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 3 9 549 IPR029943 -
Lja5g3183 552 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3183 Lja-Chr5 61790293 61795949 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g3183 38 547 Organic Solute Cotransporters AT2G05760 56.164 0.0 607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3183 5 61790293 61795949 Lja5g3183 5 61790293 61795949 ECH