Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3182 ATGGCCCTGTCGGAGCTTTACAGCCTAATCACCTCCGATTGCTGGTCATTTCTCACAAACATTTCTCGCAAGACCCTTCGTTGCAGAGCAAGCGCAGAGAACCTCATGGCCTTCGTCCGCGAGCTCCTCCCCATCATCGAGGAGATAAAGTACACCGGCGTCGAGCTCCCTCCGCCGCGACAGTTTCAGCTCGACCGCCTCTCCGAGGTGCTCCGCTCCGGCGTCGAGCTCTCCCACAAAGCGCTCTCCTCCAGCCGCTGGAACGTCTACCGGAACTACCAGCTCGCGAAGAAGATGGATAGCCTCGAGAAGACTGTCAAGGAGTATCTGAAGCTTCCCTCGCAGGTTCACATTCTGGCTGACGTCAACCATGCCCGGTTCGAGATGGCTCAGCGGTTCGACCGGCTTGAGGAGTCGAACCGGCGGTTGGAGCAGTTCTTCGCCGGCATGAAGATTGGGGTTGGTGGTGGAGGGTGGGTGGAGGAGGCTGTGAGGAGTATGGAGGAGGATGAGACGTGGGTCGAGGGTAGTTCTGGGAATTTGAGTGTGGGTTTGGAGTTGGGGAAGAAGAAGGTTTTGGAGATGGTTGTTCGGAGAAATGATGTTTCGGTTGTTGGGATTTGTGGGATTGGTGGGTCTGGGAAGACCACTCTTGCAAGAGAGGTTTGCAGAGATGATCAAGTTCGATGTCATTTCAAGGAGAGGATATTGTTTCTGACTGTCTCGCAATCACCAAACGTAGAGGAACTGAGAGCGAAGATCTTTGGACACATCATGGGAAACAGAGGCTTGAATGCTAATTATGCTGTTCCGCAGTGGATGCCGCAGTTTGAGTGCCAAAGCCAATCTCAAATCCTGGTTGTTTTGGATGATGTTTGGTCACTCCCCGTGCTAGAGCAGCTTGTATTGAGAGTACCTGGCTGCAAATATCTTGTGGTGTCCAGGTTCAAATTCCAAAGAATTTTTAATGATACTTATGATGTGGAATTGCTGAGTGAAGGGGATGCCCTGTCTTTGTTTTGCCACCATGCTTTTGGACATAAATCAATCCCCTTTGGTGCTAATCAGAATTTAATCAAGCAGGTTGTGGCTGAGTGTGGAAGGCTTCCACTGGCTCTTAAAGTGATTGGAGCTTCTTTGAGAGATCAGAATGAGATGTTTTGGTTAAGTGTTAAAACAAGGCTTTCTCAAGGCCTAAGCATAGGTGAATCCTATGAAGTCAATCTGATTGATCGAATGGCAATCAGTACTAACTACCTACCCGAAAAGGTCAAGGAGTGCTTCTTGGACTTGTGTGCGTTTCCGGAGGATAAAAAGATCCCTCTAGAAGTTCTAATCAACATGTGGGTTGAAATCCATGACATTGACGAAACAGAAGCATATGCTATCGTGGTTGATCTTTCAAACAAGAATCTCCTCACCTTAGTGAAAGAGGCGCGTGTTGGCGGAATGTATAGCAGCTGCTTTGAGATTTCTGTTACTCAACATGACATCCTGAGAGATCTTGCTCTTAATTTGAGCAACCGCGGTAGCATTAACGAACGCTTAAGATTAGTGATGCCAAAACGAGAAGGAAATGGACAACTCCCGAAAGAGTGGTTGAGATACAGGGGCCAACCACTCGAAGCTCGGATTGTTTCAATTCACACAGGTGAAATGACAGAAGGGGACTGGTGTGAACTGGAATTTCCCAAGGCTGAAGTGCTGATTCTTAACTTCACATCCAGTGAATACTTCCTACCTCCCTTCATTGCAAGAATGCCGAGTTTGAGAGCATTGATAGTAATAAACTACAGCACTACATATGCTCACCTTCACAATGTTTCAGTTTTTAAGAATTTGAGTAACTTGAGGAGCCTCTGGCTTGAAAAAGTTTCCACCCCTCAATTATCAGGCATTGTATTGGAAAAATTGGGAAAACTCTTTATAGTCCTCTGTCAGGTGAATAACAGTTTGAAGGGGAAAGATGCAAACCTGGCCCATATATTCCCTAATCTCTCTGAGTTCACTCTTGATCACTGTGATGATTTGACTGAGTTGCCTTCAAGTATTTGTGGAATCAAGTCACTCCAAAATTTGAGTCTCACAAACTGCCACAATTTGACCTATCTCCCTGTTGAATTGGGCACTCTCGAGTCTCTTGAGATTCTTCGCTTATATGCTTGTCCTGATCTGAAAGCACTTCCTTCTAGCATCTGTGACATGATTAGATTGAAGTACATTGACATTTCTCAATGTGTTAACCTAACATCCTTCCCTGAAGGGATTGGTAAATTAGTGAGCTTGGAGAAGATTGATATGAGGGAATGCCCTGGGGTTTGGAGTTTGCCAAAGTCTGTAGTGTCATTACAGTCACTGCACCTAGTAATCTGTGATGAGGAAGTGTCTTGGATGTGGAGAGAAGTAGTTCAGAAGGTCAAGCCAAGTGTCGATATTCAAGTGCCTAAACAGTGCTATGATCTGGAGTGGCTACATGAGTGA 2481 0.4631 MALSELYSLITSDCWSFLTNISRKTLRCRASAENLMAFVRELLPIIEEIKYTGVELPPPRQFQLDRLSEVLRSGVELSHKALSSSRWNVYRNYQLAKKMDSLEKTVKEYLKLPSQVHILADVNHARFEMAQRFDRLEESNRRLEQFFAGMKIGVGGGGWVEEAVRSMEEDETWVEGSSGNLSVGLELGKKKVLEMVVRRNDVSVVGICGIGGSGKTTLAREVCRDDQVRCHFKERILFLTVSQSPNVEELRAKIFGHIMGNRGLNANYAVPQWMPQFECQSQSQILVVLDDVWSLPVLEQLVLRVPGCKYLVVSRFKFQRIFNDTYDVELLSEGDALSLFCHHAFGHKSIPFGANQNLIKQVVAECGRLPLALKVIGASLRDQNEMFWLSVKTRLSQGLSIGESYEVNLIDRMAISTNYLPEKVKECFLDLCAFPEDKKIPLEVLINMWVEIHDIDETEAYAIVVDLSNKNLLTLVKEARVGGMYSSCFEISVTQHDILRDLALNLSNRGSINERLRLVMPKREGNGQLPKEWLRYRGQPLEARIVSIHTGEMTEGDWCELEFPKAEVLILNFTSSEYFLPPFIARMPSLRALIVINYSTTYAHLHNVSVFKNLSNLRSLWLEKVSTPQLSGIVLEKLGKLFIVLCQVNNSLKGKDANLAHIFPNLSEFTLDHCDDLTELPSSICGIKSLQNLSLTNCHNLTYLPVELGTLESLEILRLYACPDLKALPSSICDMIRLKYIDISQCVNLTSFPEGIGKLVSLEKIDMRECPGVWSLPKSVVSLQSLHLVICDEEVSWMWREVVQKVKPSVDIQVPKQCYDLEWLHE* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3182 826 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 7 823 - -
Lja5g3182 826 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 431 IPR027417 -
Lja5g3182 826 Gene3D - 178 323 IPR027417 -
Lja5g3182 826 Pfam NB-ARC domain 189 397 IPR002182 GO:0043531
Lja5g3182 826 Gene3D Ribonuclease Inhibitor 549 810 IPR032675 -
Lja5g3182 826 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 18 132 IPR008808 -
Lja5g3182 826 Gene3D - 411 502 IPR036388 -
Lja5g3182 826 Gene3D - 330 408 IPR042197 -
Lja5g3182 826 ProSiteProfiles RPW8 domain profile. 1 148 IPR008808 -
Lja5g3182 826 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 823 IPR044974 GO:0006952
Lja5g3182 826 PRINTS Disease resistance protein signature 685 701 - -
Lja5g3182 826 PRINTS Disease resistance protein signature 366 380 - -
Lja5g3182 826 PRINTS Disease resistance protein signature 279 293 - -
Lja5g3182 826 PRINTS Disease resistance protein signature 204 219 - -
Lja5g3182 826 SUPERFAMILY RNI-like 564 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3182 Lja-Chr5 61782141 61786358 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3182 5 61782141 61786358 Lja5g3182 5 61782141 61786358 ECH