Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3181 ATGGCTCTGACTGACTTCTTCGCCGGCGAGATTGCGACGGAGCTTCTCAAAATGCTCATAACAATCTCCCGCAAGTCCCTCCTATGCAGAGCCAGCGCCGATCAACTCATCACTTACATCAACGACCTCCTCCCCACCATCCAGGAGATCAAATACTCCGGCGTCGAGCTTCCGGCACCGCGGCAGTTTCAGCTCGACCGCCTCTCGGAGGTTCTCCGCTCCGGCGTCGAGCTCTCTCACAAGGTTCTCTCCTCCGGGCGGTGGAATGTTTACCGGAACCTCCAGCTGGCGAAGAAGATGGAGAGGCTTGAGAAGAACGTGTCACGGTTTATTCAGGGGCCCATGCAGGCTCATATCTTGGCTGATGTGCTTCATGCCCGGTGCGAGATGGCTGAGCGGTTTGACCGGGTTGAGGCTTCGAATATGCGGTTGGAGAGGTACTTTGGTGCTATGAAGATTGGGGTTGGTGGGGGTGGGTGGGTGGAGGAGGCTGTGAGGAGTGTGGAGGAGAGTGAAGCGTTGTGGGTTGATGGTGGTTCTGGGAATTTGTTGGGTGTGGGTTTGGAATTGGGGAAGATGAAGGTTAAGGAGATGGTTGTTGGAAGAAATGATCTTTGGGTTGTTGGGATTTGTGGGATTGGTGGGTCTGGGAAGACCACTCTTGCAAAAGAGGTTTGCAGAGATGAACAAGTTCGATGTTATTTCAATAAGAGGATCTTGTTCCTGACTGTTTCGCAATCACCAAATGTGGAGCAGTTGAGAACGAAGATTTGGGGGTATATTATGGGGAACGCGAGCTTGGATCCTAATTATGTGGTTCCTCAGCGGATGCCACAATTTGAATGGAAGAGTGAACCTCGAAGAACCCTGATTGTTCTGGATGATGTTTGGTCACTCTCCGCGCTGGAGCAGCTTGTGTGTAGAATACCAGGTTGCAAATTTGTTGTGGTGTCCAGGTTCCAATTCCCTACAATTTTCAATGCCACTTATGATGTAGAACTTCTGAGTGAAGAGAATGCTCTCTCTTTGTTCTGTCATCATGCTTTTGGACAGAAATCAATCCCTTCTGGTGCTAATGAGAATTTGGTCAAGCAGGTTGTGAGTGAGTGTGAAAGGCTTCCACTGGCTCTTAAAGTGATTGGAGCTTCGTTGCGAGATCAAACTGAAATGTTTTGGGCAAGTGTGAAAAACAGGCTGTCTCGAGGGCTAAGCATAGGTGAATCCCATGAAGTGCATCTGATTGATAGAATGGCTATCAGTATCAACTACCTACCAGAAATGATCAAAGAGTGCTTCTTGGACCTGTGTACCTTTCCTGAGGATAAAAAAATTCCCATGGATGCTCTCATCAATATGTGGGTTGAAATCCATGATATTGATGAAAAGGATGCTTTTGCTATTGTTGTTGAGCTCTCAAATAAAAACCTTCTCACCTTGGTGAAAGAAGCACGTGCTGGTGGCATGTATAGCAGTTGCTTTGAGATCTCAATTACTCAACATGATGTGTTGAGAGACCTTGCTCTTCATTTGAGCAACCATGCGAGAGTAAATGAACGCCGGCGGTTAGTTATGCCAAAACGAGAGAATGGACTCCCTAAAGAGTGGTTGAGACACAAGAACAGACCATTTGAGGCTCAGATTGTTTCGATTCACACAGGTGAAATGAAAGAATTGGACTGGTGTAAACTGGAATTTCCCAAGGCTGAAGTGTTGATCATTAATTTCACATCCAGTGAATACTTTTTACCACCCTTTATTGATAGAATGCCAAATTTGAGGGCACTGATAGTAATAAACCACAGTGCATCATATGCTTGCCTTCACAATGTTTCAGTTTTACAGAATTTGTTCAACTTGAGGAGCCTCTGGCTTGAAAAAGTTTCCATCCCCCAGTTTGGAGGATTTTTCTTTGAAAAATTGGGCAAGTTATTCATAGTCCTCTGTAAGGTTAACAATAGTTTGAATGAAAAAGAGGCAAACCTGGCCAGAGTCTTCCCTAACCTCTCCGAGCTTACTCTTGATCATTGTGATGATGTGACTGAGTTGCCCCCAAGTATTTGTGGTTTTCATTCACTCCAGACTTTGAGTGTCACCAACTGCCACAGTTTGATCCAACTTCCTGTTGAACTGGGCGCGCTGAGGTCCCTAGAGATCCTTCGCTTTTACGCTTGTCCAAATCTGAAAACACTTCCTCCTAGCATCTGTGACATGATTAGATTGAAGTATGTTGACATTTCTCAATGTGTTAGCTTGTCATGCTTCCCTGAAGAGATTGGTAGGTTAGTAAGCTTGGAGAAGATCGACATGAGGGAATGCTCCATGATTAGGAATGTACCAAAGTCTGCAATTTCATTGCAGTCTCTGAGGCTTGTAATATGTGATGATGAGGTATTTGGTATCTGGAAAGATGTTCAGAAGGCTAATGCAAGTGTTCATATTCAAGTATCAGAGCAGCACTTTGATCTGGACTGGCTTAAAGAGTAA 2484 0.4545 MALTDFFAGEIATELLKMLITISRKSLLCRASADQLITYINDLLPTIQEIKYSGVELPAPRQFQLDRLSEVLRSGVELSHKVLSSGRWNVYRNLQLAKKMERLEKNVSRFIQGPMQAHILADVLHARCEMAERFDRVEASNMRLERYFGAMKIGVGGGGWVEEAVRSVEESEALWVDGGSGNLLGVGLELGKMKVKEMVVGRNDLWVVGICGIGGSGKTTLAKEVCRDEQVRCYFNKRILFLTVSQSPNVEQLRTKIWGYIMGNASLDPNYVVPQRMPQFEWKSEPRRTLIVLDDVWSLSALEQLVCRIPGCKFVVVSRFQFPTIFNATYDVELLSEENALSLFCHHAFGQKSIPSGANENLVKQVVSECERLPLALKVIGASLRDQTEMFWASVKNRLSRGLSIGESHEVHLIDRMAISINYLPEMIKECFLDLCTFPEDKKIPMDALINMWVEIHDIDEKDAFAIVVELSNKNLLTLVKEARAGGMYSSCFEISITQHDVLRDLALHLSNHARVNERRRLVMPKRENGLPKEWLRHKNRPFEAQIVSIHTGEMKELDWCKLEFPKAEVLIINFTSSEYFLPPFIDRMPNLRALIVINHSASYACLHNVSVLQNLFNLRSLWLEKVSIPQFGGFFFEKLGKLFIVLCKVNNSLNEKEANLARVFPNLSELTLDHCDDVTELPPSICGFHSLQTLSVTNCHSLIQLPVELGALRSLEILRFYACPNLKTLPPSICDMIRLKYVDISQCVSLSCFPEEIGRLVSLEKIDMRECSMIRNVPKSAISLQSLRLVICDDEVFGIWKDVQKANASVHIQVSEQHFDLDWLKE* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3181 827 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 133 IPR008808 -
Lja5g3181 827 Gene3D - 334 415 IPR042197 -
Lja5g3181 827 PRINTS Disease resistance protein signature 207 222 - -
Lja5g3181 827 PRINTS Disease resistance protein signature 759 775 - -
Lja5g3181 827 PRINTS Disease resistance protein signature 283 297 - -
Lja5g3181 827 PRINTS Disease resistance protein signature 370 384 - -
Lja5g3181 827 Gene3D - 185 323 IPR027417 -
Lja5g3181 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 435 IPR027417 -
Lja5g3181 827 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 3 824 - -
Lja5g3181 827 Gene3D - 416 506 IPR036388 -
Lja5g3181 827 Gene3D Ribonuclease Inhibitor 533 808 IPR032675 -
Lja5g3181 827 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Lja5g3181 827 SUPERFAMILY L domain-like 565 793 - -
Lja5g3181 827 Pfam NB-ARC domain 195 403 IPR002182 GO:0043531
Lja5g3181 827 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 824 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3181 Lja-Chr5 61772914 61777023 Dispersed/Wgd