Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3174 ATGATGCAGAGAAGCTTGAGAAGTGCAAGTAAAGGTGGAAAAGCCTCAAGCAAGGAAAGAAAATTGGCTTTGCAACAAGATGTGGATAGGTTGAAGAAGAAGTTGAGGCATGAGGAGAACATCCACAGGGCATTGGAGAGGGCTTTCAATAGACCTTTGGGAGCTCTGCCACGTCTTCCTCCTTATCTCCCTCCCTATACACTAGCACTTCTTGCTGAAGTGGCAGTTCTGGAAGAGGAAGTTGTTAGGCTTGAGGAACAGGTTGTGCATTACAGACAGGACTTGTACCAAGAAGCTGTCTACATGTCATCTTCTAAGAGGAAAATGGAGCATTTACCTCCACCAAACAGTTCAAACTCAATAATGGACAGTCCCAAATTGGATAAATTGAAGTCTCCTTCCCAAACAGCTGGTAGTCCAGCAACTAGCCACGCCACAACACTCCCTGGCTTGTCAGAGAATAGACAAGGAAAGGAGAACCAATCATGTACAAATTCTTCCAAGACTAAGCAGCAATCCTCCAAGCAAATGAACAAAACGCCAATTAAAAAACTTAATATTGATAATAAAGTACTCCAGAAAAAGTGCAATCCTCCAAAAATGAAGCAAGAACCAAAGGTGAATAACCAGCAAATAGCAGAATTGAGGCATCCTAGTCCAACACACAAAATTTCACCAGAAGCTGAATGCCCAAATATAATATCTGAAAATATTCTGAAGTGCTTATCAAGCATTCTCTTGAGAATGAGTGCTGTGAAGAATACAGGTTCTGCAGGTGACATATCACCCTTATGGGCGACGAAACCTCGAACATGTGCTGAAGAAACAGAGTTTTGGGATCCCTATGGTATCTGCTTGGAATGTGGAAAGAGGGATATTGGTCCATACAAACAACTATGTGCAATTGATGCTAAATCTTTCAATCCAAAACGAACTACAAATACTTTGTTTTTACTACATCGGTTAAAAATTCTTTTTAGGAAACTAGCCTCTGTCAACTTGAAGAACCTCAACCATCAGGAGAAGCTTGCGTTCTGGATCAACACTTATAACTCGTGTATGATGAATGCATTCATAGAGAATGGCATACCAGAGAGTCCTGAATTGGCCGTTGCGCTGATGCGGAAGGCAACAATAAATGTTGGTGGACACATGCTAAGTGCAACAACCATAGAGCATTTCATTTTAAGGCTTCCTTATCACAGCAAATTTACGTTTTCCAAGGGAGTGAAAAATCATGTAACGATGGCAAGAAGCATATATGGACTGGAACTGTCAGAACCCCTTGTGACATTTGCTCTCTCTTGTGGAACTTGGTCCTCTCCTGCTGTGAGAGTTTACACAGCATCCCAAGTTGAGAATGAACTTGAAGTGGCCAAAAGAGAGTACTTGCAGGCAGCGGTTGGAATTTCAACATCGAGATTCGCTATCCCGAAGCTGCTGGATTGGTATTTACTGAACTTCGCAAAAGACTTGGAATCATTGTTGGATTGGATCTGCCTCCAGTTACCAAGTGAACTAGGGAAAGAAGCCATTAATTTCCTTGACAAGAGAAAAACTGAGCCCCTCTCACAATTTGTACAAATTATGCCATATGAGTTCAGCTTCAGATACTTGATAAGCACATAG 1629 0.4174 MMQRSLRSASKGGKASSKERKLALQQDVDRLKKKLRHEENIHRALERAFNRPLGALPRLPPYLPPYTLALLAEVAVLEEEVVRLEEQVVHYRQDLYQEAVYMSSSKRKMEHLPPPNSSNSIMDSPKLDKLKSPSQTAGSPATSHATTLPGLSENRQGKENQSCTNSSKTKQQSSKQMNKTPIKKLNIDNKVLQKKCNPPKMKQEPKVNNQQIAELRHPSPTHKISPEAECPNIISENILKCLSSILLRMSAVKNTGSAGDISPLWATKPRTCAEETEFWDPYGICLECGKRDIGPYKQLCAIDAKSFNPKRTTNTLFLLHRLKILFRKLASVNLKNLNHQEKLAFWINTYNSCMMNAFIENGIPESPELAVALMRKATINVGGHMLSATTIEHFILRLPYHSKFTFSKGVKNHVTMARSIYGLELSEPLVTFALSCGTWSSPAVRVYTASQVENELEVAKREYLQAAVGISTSRFAIPKLLDWYLLNFAKDLESLLDWICLQLPSELGKEAINFLDKRKTEPLSQFVQIMPYEFSFRYLIST* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3174 542 MobiDBLite consensus disorder prediction 1 24 - -
Lja5g3174 542 Pfam Leucine-zipper of ternary complex factor MIP1 17 98 IPR025757 -
Lja5g3174 542 MobiDBLite consensus disorder prediction 106 187 - -
Lja5g3174 542 PANTHER EXPRESSED PROTEIN 3 541 - -
Lja5g3174 542 Pfam Protein of unknown function, DUF547 335 464 IPR006869 -
Lja5g3174 542 MobiDBLite consensus disorder prediction 110 183 - -
Lja5g3174 542 PANTHER TRANSCRIPTION FACTOR 3 541 - -
Lja5g3174 542 Coils Coil 14 48 - -
Lja5g3174 542 Coils Coil 67 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3174 Lja-Chr5 61698268 61702641 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3174 5 61698268 61702641 Lja5g3174 5 61698268 61702641 ECH