Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3166 ATGTGGTTAAGTGCGAAACCCGTGCAACAACTATGGTTCCCAGCAACACCACCTCCTCCGCCTTCTAAGTGGAGCTCCGCCACAAGAACAACCGTCAAAATGAGGGTGGTTTTCAACAACACTTCTCCGCCGGTGCAAAAGAAGAGGAAGCGGTACCGGAAGCTCTACCCTGGAGAGACCACTGGAATCACCGAAGAAATGAGGTTCGTCGCCATGAAACTCCGCAACGACACCACCGTCGCCACCGCTCCCTCCACTTCCCATGACGATACGTGGCAGCCCTCCATGGATGGCTTCCTCCGCTTCTTGGTCGACAACAACCTCGTCTTCGCCACACTCGAACGCATCGTCGACGAGTCCGACAACGTTTCATATGCGTACATGAGGAAATGTGGATTGGAAAGATCAAAAGGGATATTGAAGGATCTAGCATGGTTTGAGGAACGAGGGCTTGTGGTTCCGACTCCCAGCTCTCCGGGGGTTACATATGCAAAGTATTTGGAGGAGCTTGCAGAGACAAGTGCGCCCTTGTTTCTCTCCCATTTCTACAACATCCATTTTTCTCATATAGCTGCTGGTCAGGTCATAGCAAAAAAGGTTTCTGAACAGCTCCTGGAAGGTAAGGAGCTGGAATTTTTCAGATGGGAAGGAGATGTACCAGAAATGCTGAAAGGTGTTCGTGAGAAGCTTAACATGCTCTCAGAGCATTGGTCTCGAGATGAAAAAAATAAATGTTTAAGAGAAACAACAAAGTCATTCCGGTATATGGGACAGATTGTTCGCCTGATCATCTTATAA 798 0.4875 MWLSAKPVQQLWFPATPPPPPSKWSSATRTTVKMRVVFNNTSPPVQKKRKRYRKLYPGETTGITEEMRFVAMKLRNDTTVATAPSTSHDDTWQPSMDGFLRFLVDNNLVFATLERIVDESDNVSYAYMRKCGLERSKGILKDLAWFEERGLVVPTPSSPGVTYAKYLEELAETSAPLFLSHFYNIHFSHIAAGQVIAKKVSEQLLEGKELEFFRWEGDVPEMLKGVREKLNMLSEHWSRDEKNKCLRETTKSFRYMGQIVRLIIL* 266
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3166 265 Gene3D - 64 264 IPR016084 -
Lja5g3166 265 PANTHER HEME OXYGENASE 1, CHLOROPLASTIC-RELATED 22 265 IPR016951 -
Lja5g3166 265 CDD HemeO 62 263 IPR002051 GO:0004392|GO:0006788
Lja5g3166 265 Pfam Heme oxygenase 98 261 IPR016053 GO:0004392|GO:0006788
Lja5g3166 265 SUPERFAMILY Heme oxygenase-like 91 262 IPR016084 -
Lja5g3166 265 PANTHER INACTIVE HEME OXYGENASE 2, CHLOROPLASTIC-RELATED 22 265 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lja5g3166 Lja-Chr5 61535217 61538833 Dispersed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3166 5 61535217 61538833 Lja5g3166 5 61535217 61538833 ECH