Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3131 ATGGTTCATTGGATACATGTTGCGGTGGTAGCAGCCACCACGGGGAGTATTGCAACCCTTTTTCTGGTTTTCATGTGGCGCCGGTGTCATCACAAGAGAGATCATCTTGATCAGAGGAGCAGGAAACAAGGCAATTTTTTTGTCTGGGCTGATCATCCCTACCTTGCTGCTGATGCTGTTGAAAATGGATGGTCTAGATTTGCATTCACCAGCTACAATAGCAACATATCATCATCTAGTTCAAAGAGATCAACCATTTTAGGAGCATGTGCAGCTGGTGAAAATGGAAGAGAATCTGAGGCTGAGATAAGCTGGGATGTGTGTCATGGATCAAGTGAATTTATGCAGAAGATAAGGCTCAATTCTGGGTTGAAGAAAGATGTCCATCCAAATTACAACTCTTCCATGAGTGTTGCTTCTTCTGTCATTAGAGCTGCTCTGCCTCTACCTGGGGAGAAGACAAAACTCCTCATTCAAGATGGTTCAAATGCTAAGAGTAATTTGGGCAATGTTGAGGATATGAAACTTGATGGTACAGAGGGTGGGAAGAGTGGTTCAGTGATGTTCTCATTGGGTTTAACAGCAGGAGGAGCTGTTCCTCTAAGAATCCCAGGCACCTACCCTAGGAGCATTGGATTCAACTCAAATGGTTCTGTCTTTTTTGATGGAATGAAACTTATATTGGAATCTGAGAAGGCTCAATGGGCAGGAACCAATACAATAGCTGGCTGTGGATTTGATCCAAGAATGAAGAAGGTTTTCTTCACATTAGGCTCAGAGTTAGTGCATGTGATTCACTGTCAATTAGTGGAATTTGGCACTCCACTTTTCCCAACTTTGGCTGCAAACACAGACATTGAGGTTTTAGTTAATTTTGGACAAAGTGCATTCAAATATGCACCTGCAAATGCAAACAGAACACCAAATCCATGCTTCATAGCCCCACTTGTGTATTCTTCTGGTGCTACCCTGGGCTATGATGACAGCAAGGAGCTATTCTCCATGGGAAGGATTGATTCTCAGTGGCTTAATCAATCCACACCCAAAGGGAATCACAGTAATTATGTGAATAACAATCGAGCTTCCGAGTTTGATGAGGAATCAGAGGCTGATCTATTTGAAATTGTGTTGGATGGTTCTGAAAAATCTCCAAAATCATAG 1161 0.4255 MVHWIHVAVVAATTGSIATLFLVFMWRRCHHKRDHLDQRSRKQGNFFVWADHPYLAADAVENGWSRFAFTSYNSNISSSSSKRSTILGACAAGENGRESEAEISWDVCHGSSEFMQKIRLNSGLKKDVHPNYNSSMSVASSVIRAALPLPGEKTKLLIQDGSNAKSNLGNVEDMKLDGTEGGKSGSVMFSLGLTAGGAVPLRIPGTYPRSIGFNSNGSVFFDGMKLILESEKAQWAGTNTIAGCGFDPRMKKVFFTLGSELVHVIHCQLVEFGTPLFPTLAANTDIEVLVNFGQSAFKYAPANANRTPNPCFIAPLVYSSGATLGYDDSKELFSMGRIDSQWLNQSTPKGNHSNYVNNNRASEFDEESEADLFEIVLDGSEKSPKS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3131 386 PANTHER RAN BINDING PROTEIN 9-RELATED 42 151 - -
Lja5g3131 386 PANTHER SPLA/RYANODINE RECEPTOR (SPRY) DOMAIN PROTEIN 42 151 - -
Lja5g3131 386 PANTHER RAN BINDING PROTEIN 9-RELATED 151 383 - -
Lja5g3131 386 PANTHER SPLA/RYANODINE RECEPTOR (SPRY) DOMAIN PROTEIN 3 36 - -
Lja5g3131 386 PANTHER RAN BINDING PROTEIN 9-RELATED 3 36 - -
Lja5g3131 386 Gene3D - 124 307 IPR043136 -
Lja5g3131 386 PANTHER SPLA/RYANODINE RECEPTOR (SPRY) DOMAIN PROTEIN 151 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3131 Lja-Chr5 61095507 61097881 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3131 5 61095507 61097881 Lja5g3131 5 61095507 61097881 ECH
Lja5g3131 5 61095507 61097881 Lja1g4141 1 52630085 52632935 PCT