Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3119 ATGGAGTATCTAGGGATTGATGTCACTTGCGCCGTGAATTCTCTCCGCCATGGAAACTTCCCTGACAAGGATTGCTTGCTCCCTCTCATTTCCAAACTCCTCGGTTACGCCATCGTCGCCGCTTCCACCACCGTCAAACTCCCTCAGATTTTGAAGATTCTGAAGCATCAGAGCGTGAGAGGTCTCAGCATGCTGTCTTTTGAGCTTGAAGTTGTTGGATATACCATTGCTCTGGCTTATTGTCTTCACAAAGGCCTTCCGTTTTCTGCTTATGGAGAATTGTTGTTCCTCTTGATTCAAGCTTTAATATTGGTTGCCATAATCTACTACTATTCTCGACCTGTGCGTACAGCAACATGGATCCGGGCATTACTATATTCTGCTGCAGCACCCACTATCTTAGCCGGTCAAATTGATCCTTTCCTCTTTGAGGCTTTGTATGCATCCCAACATGCAATCTTTCTTTGTGCAAGGATCCCACAGATATGGCAAAACTTTTCTAACAGAAGTACAGGGGAGCTCAGCTTCTTAACTTCTTTTATGAATTTTGGAGGTTCAATGGTTAGGGTATTCACAACCATCCAAGAAAATGCACCAAAAAGTGTACTATTGGGCTATGCAATTGGTGTTGCGACAAATTTTACCATCTTAAGTCAGATAGTGTTATACCAAAAGCCTCGAGCTGAGAAAGAGAAGAAAATGGAATAG 708 0.4322 MEYLGIDVTCAVNSLRHGNFPDKDCLLPLISKLLGYAIVAASTTVKLPQILKILKHQSVRGLSMLSFELEVVGYTIALAYCLHKGLPFSAYGELLFLLIQALILVAIIYYYSRPVRTATWIRALLYSAAAPTILAGQIDPFLFEALYASQHAIFLCARIPQIWQNFSNRSTGELSFLTSFMNFGGSMVRVFTTIQENAPKSVLLGYAIGVATNFTILSQIVLYQKPRAEKEKKME* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3119 235 SMART ctns 44 75 IPR006603 -
Lja5g3119 235 SMART ctns 156 187 IPR006603 -
Lja5g3119 235 Gene3D - 29 112 - -
Lja5g3119 235 PIRSF Mpdu1 6 235 IPR016817 -
Lja5g3119 235 Pfam PQ loop repeat 151 201 IPR006603 -
Lja5g3119 235 Pfam PQ loop repeat 30 89 IPR006603 -
Lja5g3119 235 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 PROTEIN HOMOLOG 1 2 226 - -
Lja5g3119 235 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED 2 226 IPR016817 -
Lja5g3119 235 Gene3D - 150 235 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g3119 1 223 Miscellaneous Gene Families AT4G07390 75.785 1.19e-127 358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3119 5 60939147 60944515 Lja5g3119 5 60939147 60944515 ECH