Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3114 ATGGGACCTATGTCTGTCCTGTCATGGCTTCTGTGTGTTCTGGCAGCAGCCCGTTGTGGCGAAGGTGCTGTTAAAGACATATTCATCCTGGCAGGACAGAGCAACATGGCCGGGCGGGGCGGTGTTACCGATGGGAAATGGGACGGTAATGTCCCACCGGAGTCTGCGCCCAGCCTACAGGTTTTGCGGCTGAGCGCGAGACTCCAGTGGGAGGAAGCCTGCGAGCCTCTGCACGCGGACATTGATGTCGGGAAGAGGTGCGGGGTTGGGCCTGGGCTGGCCTTCGCCAACGAGGTTGTCCGGTTGAGAGGTGGTGGTGGGCCGGTGCTGGGCTTGGTGCCTTGTGCAGTGGGAGGGACAGGGATTGTGCAGTGGAGGCGGGGGTCGCGTTTGTACGGTGAGTTAGTGCGGCGAGCTAGTGAGTCCGTGAAGAATGGTGGTGGCACGATAAGAGCGATTGTTTGGTATCAAGGTGAGAGTGATACGGTGATAGAAGAGGATGCTGACGCGTATAAGCTTAGAATGGAGACATTTGTTACGGATCTTCGCCATGACCTGCATCTTCCATCTCTTCTTGTTATCCAGGTCGCACTTGCATCCGGGGAAGGCAAGTTTATTGAGAAGGTAAGAAATGCTCAATTGGGGATCAAACTATCTAACGTGAAGTGTGTCGATGCTAAGGGATTGCGCCTCAAGGCAGATAATCTTCACCTTACTACCATGTCTGAGGTTCACTTGGGTATCCAATTAGCTCATGTCTATCAAGCATCCATCAGACATCAATCTAACCATACACAAGGTAGCTAG 807 0.5366 MGPMSVLSWLLCVLAAARCGEGAVKDIFILAGQSNMAGRGGVTDGKWDGNVPPESAPSLQVLRLSARLQWEEACEPLHADIDVGKRCGVGPGLAFANEVVRLRGGGGPVLGLVPCAVGGTGIVQWRRGSRLYGELVRRASESVKNGGGTIRAIVWYQGESDTVIEEDADAYKLRMETFVTDLRHDLHLPSLLVIQVALASGEGKFIEKVRNAQLGIKLSNVKCVDAKGLRLKADNLHLTTMSEVHLGIQLAHVYQASIRHQSNHTQGS* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3114 268 PANTHER OS06G0729725 PROTEIN 16 258 - -
Lja5g3114 268 Gene3D SGNH hydrolase 24 256 IPR036514 -
Lja5g3114 268 PANTHER ESTERASE, PUTATIVE (DUF303)-RELATED 16 258 - -
Lja5g3114 268 SUPERFAMILY SGNH hydrolase 25 259 - -
Lja5g3114 268 Pfam Carbohydrate esterase, sialic acid-specific acetylesterase 25 254 IPR005181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3114 Lja-Chr5 60862349 60871481 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3114 5 60862349 60871481 Lja5g3114 5 60862349 60871481 ECH
Lja5g3114 5 60862349 60871481 Lja1g4131 1 52466940 52468814 PCT