Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3109 ATGTCCGACCCGGAATTCCAACACTCCGCCGCGTCTCCGTTGAACCCCAACCCCGCCACCTCCTTCACCATATGGCCTCCGACACAGCGCACAAGCGACGCCGTCATCAACCGCCTCATCGAAACCCTCTCCGGCCCCTCCTCAGTCCTCTCCAAGCGCTACGGCACAATGTCACCTCACGACGCCTCCGCCGCCGCGTATCAGATCGAGGACGCCGCGTTCTCCGCTGCCTCCTCCTCCGTCTCTCCTGACGATGACGGCATCCAGATCCTCCATGTCTACTCCAAGGAGATCAGCAAGCGCGTGGTCGGCAATGTCAAGGCCAAACCTCCTCCCGCCGGTGACGATGTAGACTCCGACGTCGCTCCTCCACCCGCCCAAGAAGCTGAGTCCGCCGCCGTTTCCGACTCTTGA 414 0.628 MSDPEFQHSAASPLNPNPATSFTIWPPTQRTSDAVINRLIETLSGPSSVLSKRYGTMSPHDASAAAYQIEDAAFSAASSSVSPDDDGIQILHVYSKEISKRVVGNVKAKPPPAGDDVDSDVAPPPAQEAESAAVSDS* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3109 137 PANTHER WPP DOMAIN-CONTAINING PROTEIN 1-RELATED 8 129 IPR044692 GO:0000278|GO:0048527
Lja5g3109 137 PANTHER WPP DOMAIN-CONTAINING PROTEIN 1-RELATED 8 129 - -
Lja5g3109 137 Pfam WPP domain 21 112 IPR025265 -
Lja5g3109 137 MobiDBLite consensus disorder prediction 103 137 - -
Lja5g3109 137 MobiDBLite consensus disorder prediction 1 26 - -
Lja5g3109 137 Gene3D WPP domain 21 118 IPR038214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3109 Lja-Chr5 60775575 60776262 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3109 5 60775575 60776262 Lja5g3109 5 60775575 60776262 ECH
Lja5g3109 5 60775575 60776262 Lja1g4125 1 52309841 52310714 PCT