Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3102 ATGGCGTCGAGTTTCGACCGGTGGGAGAAAGATCCTTTTTTTAACGCTGCTGAAGAAGTTCAGGAATCTGCAGACAGGATGGATTCTGCATATAGGACTTGGCTACATGCAACAAAAGATACTTCGAGTATGTGGAACTCCGATGAACTCCGCAGAGATCTACAAACTACCCTTGGCACTGCTAAGTGGCAGTTAGAGGAATTTGAACGAGCAGCGAGGTTAAATTATAGCCGGACCTCAGGTGAAGCAAGAACTAGGCACCAAGATTTTATCACTGCCATTGAAGATAAGATAACAAAAGTTGAGCATTTGTTACACGAATCATCCACTACGGGAAGTAAAGCGTCCATGCCTTGGATACATTTGGATGAAGGTGAACAAGATGAGCTTGCTTCGTTTCTTTCAGGAATGCCAGCAGCTGAAAGCAATGATCCAACTTGGTCTAAGAGTAGGGACGGTGAAAATCCACAATTAAGTGATAATGATTTAGTCATTAATTGTTCAAAGAATGTTCATATTTCGTCTGGGTTGGGTGAAGCAAAGGAGGAGACACCACGCGGGCATCGTAGGGCAGCGAGTGCTAGTGCAGATATTGGTTTTTGGAAAATTTCAGTTGCCGATGATGCACAGCAATCAAGTTCCTCCAGTGGTTCTTCTGGTCCAATGCATAAGGTACCCAGTTTATCAGGATTTGTTAGTGCCATGGAATCCAAGATGAAGTGGCCTAGGAATGGTTATAGAAAGCTGAAAGTAGTGGATCATCATAAAGAAACTAAGAGTACGCTACTTCCTACAGCTGAAACAAATAAGGGCAACATGGCATGCTACGGAAGAAGTAAAAGTAGCCTTAAGAGTTGCGATGAATGCTATGACAAGAACCTCTATGGATGGTATGGGGCTATTCGGAGACAGCTTCAAAGATCTCAATACCAAATGCAATACAGCCAGCCTGTTCGAATAACCGTTTCGATTGTTGTTCTACTTTGTTTGATCGTTTTGATTGCATTTCGCACAATGTAG 1020 0.4294 MASSFDRWEKDPFFNAAEEVQESADRMDSAYRTWLHATKDTSSMWNSDELRRDLQTTLGTAKWQLEEFERAARLNYSRTSGEARTRHQDFITAIEDKITKVEHLLHESSTTGSKASMPWIHLDEGEQDELASFLSGMPAAESNDPTWSKSRDGENPQLSDNDLVINCSKNVHISSGLGEAKEETPRGHRRAASASADIGFWKISVADDAQQSSSSSGSSGPMHKVPSLSGFVSAMESKMKWPRNGYRKLKVVDHHKETKSTLLPTAETNKGNMACYGRSKSSLKSCDECYDKNLYGWYGAIRRQLQRSQYQMQYSQPVRITVSIVVLLCLIVLIAFRTM* 340
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3102 339 MobiDBLite consensus disorder prediction 139 164 - -
Lja5g3102 339 Pfam Syntaxin 6, N-terminal 11 101 IPR015260 GO:0016020|GO:0048193
Lja5g3102 339 PANTHER OS05G0443700 PROTEIN 1 337 - -
Lja5g3102 339 SUPERFAMILY t-snare proteins 10 105 IPR010989 GO:0016020|GO:0016192
Lja5g3102 339 Gene3D - 9 109 - -
Lja5g3102 339 MobiDBLite consensus disorder prediction 137 164 - -
Lja5g3102 339 PANTHER EXPRESSED PROTEIN 1 337 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lja5g3102 Lja-Chr5 60687631 60691029 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3102 5 60687631 60691029 Lja5g3102 5 60687631 60691029 ECH
Lja5g3102 5 60687631 60691029 Lja1g4110 1 52120985 52124166 PCT