Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3101 ATGAAGATGCCAATTTTCCAGCTCCTTCAATCTGCTTTGCTTCTTCTGCTAATTTTCTGCAGCAGCTACACCATAGCAGAAAAGAAAACAGCACAGCAAGCAAAAAAAACATACATAATTCACATGGACAAGTCCACCATGCCAGCAACTTTCAACGATCACCAACACTGGTTTGACTCTTCACTCCAATCAGTATCAGAATCCGCAGAGATTCTCTACACTTACAAACACGTAGCTCACGGTTTCTCCACAAGGCTAACTGTCCAAGAAGCAGAAACACTTGCAGAACAACCAGGGGTTCTCTCTGTTTCCCCTGAAGTCAGGTACGAGCTCCACACAACCAGAACCCCAGAGTTCCTCGGGTTGCTAAAGAAAACCACAACTTTATCACCTGGCTCTGACAAGCAGAGTCAGGTGGTTATCGGGGTGCTCGACACCGGTGTGTGGCCCGAGCTGAAAAGCTTGGACGACACTGGTCTCAGCCCGGTGCCGAGCACTTGGAAAGGCCAGTGTGAAGCTGGAAACAACATGAACTCATCAAGCTGCAATAGGAAACTCATTGGAGCAAGGTTTTTCTCCAAAGGGTATGAAGCAACTCTTGGACCCATTGATGTAAGCACAGAATCAAGATCAGCGAGGGACGATGATGGACATGGAAGCCACACTTTAACAACAGCAGCAGGCTCTGCAGTCGCGGGAGCTAGCCTCTTTGGGCTAGCTTCCGGGACTGCGAGAGGAATGGCCACACAAGCGCGTGTTGCAGCTTATAAGGTGTGCTGGCTAGGTGGGTGCTTCTCCTCCGACATAGCTGCTGGAATCGACAAGGCCATTGAAGATGGTGTTAACATCATATCAATGTCTATTGGGGGAAGCTCAGCGGACTATTTCAGAGACATCATTGCAATTGGAGCTTTCACTGCCAATTCCCATGGGATTCTAGTGTCCACTTCTGCAGGAAACGGTGGACCAAGTCCTTCAAGCCTTTCCAACACAGCACCATGGATAACCACTGTGGGTGCTGGAACCATAGACCGTGATTTCCCTGCATACATCACACTTGGAAACAATATCACACACACCGGGGCTTCTCTTTACAGAGGAAAACCCTTGTCTGATTCTCCTCTGCCACTTGTCTATGCTGGTAATGCTAGCAACTTCTCTGTTGGGTATCTTTGCTTACCAGATTCTCTAGTTCCTTCAAAGGTTTTAGGCAAAATTGTGATATGTGAGAGAGGAGGGAATGCAAGGGTGGAAAAGGGTCTAGTGGTGAAGAGGGCTGGAGGGATTGGTATGATCTTAGCAAACAATGAAGAATTTGGGGAAGAGCTGGTTGCTGACTCTCACCTCCTCCCTGCAGCAGCTTTGGGCGAAAGATCCAGCAAAGCTTTGAAAGACTATGTTTTCTCCTCTCGCAATCCCACAGCAAAACTTGTGTTTGGAGGCACCCATTTGCAGGTTAAGCCTTCCCCAGTGGTTGCAGCTTTCAGCTCTAGAGGGCCAAATGGCCTAACACCAAAGATCCTCAAACCAGACCTCATAGCTCCTGGTGTCAACATCCTAGCTGGGTGGACTGGAGCAATTGGACCAACAGGTTTACCAGTTGACACAAGACATGTGAGCTTCAACATCATATCAGGAACCTCCATGTCATGCCCTCATGTGAGTGGCTTAGCTGCAATCCTCAAAGGATCTCACCCTGAATGGAGCCCTGCTGCTATAAGGTCTGCACTCATGACCACGTCTTACACAGCTTACAAAAATGGACAAACCATTCAAGATGTTGCAACTGGTAAACCTGCCACACCCTTGGATTTCGGAGCCGGACACGTGGACCCTGTTGCTTCCCTTGATCCTGGTTTGGTCTATGATGCAAATGTTGATGACTACCTTGGCTTCTTATGTGCCTTGAACTATACTTCACTAGAGATCAAGCTTGCTTCTAGGAGGGACTTTAAATGTGATCCAAAGAAGAAGTACAGGGTGGAGGATTTCAATTACCCTTCTTTTGCTGTTCCTTTGGAAACTGCTTCTGGTATAGGGGGTGGTTCTCATGCACCAATTACTGTGAAATACTCTAGGACTCTCACTAATGTGGGAACTCCAGGAACATATAAAGCTTCTGTGTCTTCTCAGTCACCATCGGTGAAGATTGCGGTTGAACCACAGATACTTAGGTTCCAGGAACTGTATGAGAAGAAGAGCTACACTGTGACATTCACAAGCAATTCAATGCCTTCTGGTACTAAGAGCTTTGCTTATCTGTATTGGTCTGATGGCAAGCATAGGGTTGCTAGCCCAATCGCGATCACATGGACATAG 2319 0.4752 MKMPIFQLLQSALLLLLIFCSSYTIAEKKTAQQAKKTYIIHMDKSTMPATFNDHQHWFDSSLQSVSESAEILYTYKHVAHGFSTRLTVQEAETLAEQPGVLSVSPEVRYELHTTRTPEFLGLLKKTTTLSPGSDKQSQVVIGVLDTGVWPELKSLDDTGLSPVPSTWKGQCEAGNNMNSSSCNRKLIGARFFSKGYEATLGPIDVSTESRSARDDDGHGSHTLTTAAGSAVAGASLFGLASGTARGMATQARVAAYKVCWLGGCFSSDIAAGIDKAIEDGVNIISMSIGGSSADYFRDIIAIGAFTANSHGILVSTSAGNGGPSPSSLSNTAPWITTVGAGTIDRDFPAYITLGNNITHTGASLYRGKPLSDSPLPLVYAGNASNFSVGYLCLPDSLVPSKVLGKIVICERGGNARVEKGLVVKRAGGIGMILANNEEFGEELVADSHLLPAAALGERSSKALKDYVFSSRNPTAKLVFGGTHLQVKPSPVVAAFSSRGPNGLTPKILKPDLIAPGVNILAGWTGAIGPTGLPVDTRHVSFNIISGTSMSCPHVSGLAAILKGSHPEWSPAAIRSALMTTSYTAYKNGQTIQDVATGKPATPLDFGAGHVDPVASLDPGLVYDANVDDYLGFLCALNYTSLEIKLASRRDFKCDPKKKYRVEDFNYPSFAVPLETASGIGGGSHAPITVKYSRTLTNVGTPGTYKASVSSQSPSVKIAVEPQILRFQELYEKKSYTVTFTSNSMPSGTKSFAYLYWSDGKHRVASPIAITWT* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3101 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 546 556 IPR023828 -
Lja5g3101 772 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 24 770 - -
Lja5g3101 772 Pfam PA domain 376 461 IPR003137 -
Lja5g3101 772 Gene3D - 344 485 - -
Lja5g3101 772 SUPERFAMILY PA domain 374 438 IPR046450 -
Lja5g3101 772 CDD PA_subtilisin_like 350 477 - -
Lja5g3101 772 ProSiteProfiles Serine proteases, subtilase domain profile. 108 616 - -
Lja5g3101 772 Pfam Peptidase inhibitor I9 37 112 IPR010259 -
Lja5g3101 772 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Lja5g3101 772 PRINTS Subtilisin serine protease family (S8) signature 545 561 IPR015500 -
Lja5g3101 772 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Lja5g3101 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 24 770 IPR045051 -
Lja5g3101 772 CDD Peptidases_S8_3 109 582 IPR034197 -
Lja5g3101 772 SUPERFAMILY Subtilisin-like 111 620 IPR036852 GO:0004252|GO:0006508
Lja5g3101 772 Pfam Subtilase family 137 607 IPR000209 GO:0006508|GO:0008236
Lja5g3101 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 112 IPR037045 -
Lja5g3101 772 Pfam Fibronectin type-III domain 663 769 IPR041469 -
Lja5g3101 772 Gene3D - 633 771 - -
Lja5g3101 772 Gene3D Peptidase S8/S53 domain 139 629 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3101 Lja-Chr5 60680922 60685311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g3101 13 772 Subtilisin-like Serine Gene Family AT5G67360 63.995 0.0 992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3101 5 60680922 60685311 Lja5g3101 5 60680922 60685311 ECH