Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3100 ATGGAACTCGTGAGCGCGAGTGATCTTTTCGTCACTGCGTCCATCGCAATCCTTCTCTCACTCCTCGTCGCGAAACTTGTCTCGTTAGCCACCACCACCGACACTCAAACCGCCACGATCCATCATTATCATGAAGAAGAACCGGCCGGTCCGGTTCTTCAGGAGGATCGGCTTACGGTTCAGACCGAGAGCAAGGTTGGTTTTATTAATCCGGTTCAAGTTGCAACCAATGTGGAAAAAACCGGACACGAATTGGTCGAAGAGGACACGGACCTCACGGTCGAGTCCGGTTCGGATTCTGCCGTCGGGTTAACGGCGGAGGTGGTGGAAGAGGAAGCTGCGGAGCGCGTGGGGGAGATTGTTGAAGAGGAAGCTTCGGCGGAGACGGCGGTTCCGGTTGTGGAGGGAGGTGAGGGGAGCGGTGAGGATTGGGAATGGGAAGGGGTTGAGAGGAGTGAGTTGGAAGAGTTGTTTATGGCGGCTACTGGATTTGTTGCTAGGAATGGATGTGGTGGTGGTGGTGGTGGCGGCGATGATGGTGGAAGTGATGTGCAGATGGAGTTGTATGGGCTTCACAAGGTTGCGACGGAAGGACCTTGCCGTGAGTCTCAGCCAATGCCTCTCATGCTCTCTGCACGTGCCAAGTGGAATGCTTGGCAAAAGCTGGGGAACATGAGTCCAGAGGTTGCTATGGAGCGGTATATCAGCCTTCTTTCAGATAAATTTCCTGGATGGATGAAAGATAGTTCTGCTGGAACAGGTGAACATGAACCGATGGAGTCAGAAAGTTCTGAGTCGGCTGCTCCAAGCACATCTTTGCCTCATCAGCAAATGATGGTAACTGATAGAGAACTCGAACTAGAGTCTGGTGCTCAGGACCATAGCCCTCTTACCGAGTCAGATTTGGAGAACAAGCATGGAAATTTTCAGGTTAAGAAATGA 942 0.5223 MELVSASDLFVTASIAILLSLLVAKLVSLATTTDTQTATIHHYHEEEPAGPVLQEDRLTVQTESKVGFINPVQVATNVEKTGHELVEEDTDLTVESGSDSAVGLTAEVVEEEAAERVGEIVEEEASAETAVPVVEGGEGSGEDWEWEGVERSELEELFMAATGFVARNGCGGGGGGGDDGGSDVQMELYGLHKVATEGPCRESQPMPLMLSARAKWNAWQKLGNMSPEVAMERYISLLSDKFPGWMKDSSAGTGEHEPMESESSESAAPSTSLPHQQMMVTDRELELESGAQDHSPLTESDLENKHGNFQVKK* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3100 313 Pfam Acyl CoA binding protein 156 238 IPR000582 GO:0000062
Lja5g3100 313 Gene3D - 148 263 IPR014352 -
Lja5g3100 313 MobiDBLite consensus disorder prediction 263 278 - -
Lja5g3100 313 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 154 247 IPR000582 GO:0000062
Lja5g3100 313 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 52 292 - -
Lja5g3100 313 MobiDBLite consensus disorder prediction 124 143 - -
Lja5g3100 313 MobiDBLite consensus disorder prediction 248 313 - -
Lja5g3100 313 MobiDBLite consensus disorder prediction 298 313 - -
Lja5g3100 313 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 3 52 292 - -
Lja5g3100 313 SUPERFAMILY Acyl-CoA binding protein 154 246 IPR035984 GO:0000062
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3100 Lja-Chr5 60669546 60673833 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g3100 95 247 Acyl Lipid Metabolism Gene Families AT4G24230 47.712 6.25e-37 134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3100 5 60669546 60673833 Lja5g3100 5 60669546 60673833 ECH