Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3098 ATGAGGAGGAGTACGCCGGAGAGGCGGAAGGCGGCGGAGACAACCACCACCAAGCGAGCTCCAACTCCGACGAGGCCACCGCTGTTACCTTCCGGCAATGTAGCTCCTCCTCCTCCGCTATCTCGGAGGGTGAAATCTCGAGAAGTTACGTCTCGGTACATGTCCTCGTCTTCTTCTTCTTCGTCTTCATCTTCTGTTTCGTCTCCTCCGAGGCGATACCATTCACCGATTGTCCCGAGGACGGTGAATTCGAGTAAGCAGAAGTCTTCGACGATAGCGGTACCGACGCCGCAAGTGAAGCGGTCTCAGTCGGCGGAGCGGCAGCGGCAGAGGCCGAGGCAAGGTACTCCTCGGCCTAGCGGGGGCGGAGTAGTCGCCTCCGCCGCCGACGCTCCGGCTGCGCAGAAGATGCTTTTTACCTCGACTAGGAGCTTGTCCGTTTCGTTCCAGGGCGAGTCGTTTTCGATCCAGGTCAGTAAACCGAAACCGGCGCAAGTTCAGAGCGTGAGGAAGAGCACGCCGGAGAGGAGGAAGGCGGCGGAGGCGGCGACGCCGACTGCTGCAAGAGGAGGAGTAAACGGAGGTTTCGACCAGAGAGAGAATTCTAGGTTGCTGGATCAGCAGCGGTGGCCGGGGAAATCACAGCAGAATGCGAATTTCATGAACAGGAGCTTGGATTGTACGGATTCCGTGAGGAAATTGAACGGTTCAAGGAACGTGGTGAGGTCGCTGCTGCAGAATTCAATGGCGGATGTGAGAGCTTCTCAGGATTCGACGCTGAGTTCGGAGATCAACAAAAACGGTGGATCTGAGCCTGAATCTGAACCGGAGCCTGTTCCTTCCGATAACGAAAGCGTGACTTCTGGAAGCTCCTCAGGAGCACAGGAATGGGGAGGAGGACAAGCGCAACGCGCGTCGTCTCGAGCGATTGTGGTGCCGGCGAGGTTCTGGCAAGAGGCTAACAATCGGTTGCGGCACCAAACGGAACCTCAACCTTCTGGAAATGGAAACAAAGCAACGGTTCCTCCGAAGCTTCTGGCGCCGAAGAAATCAGGGTTTGATAGTCCTGTATCTTCTCCACGAGGAGTTGTGAATAGCCGGCTTCAAGGTTCTCCTATTCGATCCGCGGTTCGTCCTGCTTCTCCGAGTAGGCTAGCCACGCCTTCCGTGTGGTCCCCTTCGCGCGGTGTGAGCCCATCGCGAGCCAGGAACAACGGAGTCTCTAGTAGCCTGAGTAACAGGTTTGGTAGTGAACCCTCTGTTTTGAGTTTCGCTGTTGATGTTTCGAGGGCGAAGGTCGGGGAGAATCGTATTGCTGATGCACATTCATTGAGACTCCTGCATAACAGGCTCCTGCAATGGCGTTTTGCGAATGCCAGGGCAGATGCTGCCCTCTCTGCACAGACATTGAATGCCGAGAAAAGCCTCTACGAAGCATGGGGAGCTACCTCAGAACTACGAGAATCTGTTAGGGCCAAAAGAACGGAGTTGCAGATGCTGAAACAACAATTCAAGCTGATGTCCATCCTGAAGAAGCAAATGATCTATTTGGAGGAGTGGGCTGTTTTGGATCGGGTGTACTCTAGTTCACTTTCAGGAGCTAATGAAGCACTGCAGGCTAGCACTCTTCGCCTTCCTGTTGTAGGTGGGGCCAAGACAGACCTGCTGAATTTGAAAGAGTCTATTTGTTCAGCGATGGATGTGATGCAGGCGATGGCATCCTCCATCTGCCAATTGTCACCGAAGGTTGGACTTGTAAATTCGCTGGTGGTTGAAGTTGCCAATTTGAGTGCAAAGGAACGTGCTTTGCTTGAAGAGTGCAAAGATCTCTTGTCAATGATGACAGCCATGCAGGTTAGAGAGAGTAGCCTGAGAACGCATATTACACAACAGAAATGCTTACCCAGAAGCCAACAATGA 1920 0.538 MRRSTPERRKAAETTTTKRAPTPTRPPLLPSGNVAPPPPLSRRVKSREVTSRYMSSSSSSSSSSSVSSPPRRYHSPIVPRTVNSSKQKSSTIAVPTPQVKRSQSAERQRQRPRQGTPRPSGGGVVASAADAPAAQKMLFTSTRSLSVSFQGESFSIQVSKPKPAQVQSVRKSTPERRKAAEAATPTAARGGVNGGFDQRENSRLLDQQRWPGKSQQNANFMNRSLDCTDSVRKLNGSRNVVRSLLQNSMADVRASQDSTLSSEINKNGGSEPESEPEPVPSDNESVTSGSSSGAQEWGGGQAQRASSRAIVVPARFWQEANNRLRHQTEPQPSGNGNKATVPPKLLAPKKSGFDSPVSSPRGVVNSRLQGSPIRSAVRPASPSRLATPSVWSPSRGVSPSRARNNGVSSSLSNRFGSEPSVLSFAVDVSRAKVGENRIADAHSLRLLHNRLLQWRFANARADAALSAQTLNAEKSLYEAWGATSELRESVRAKRTELQMLKQQFKLMSILKKQMIYLEEWAVLDRVYSSSLSGANEALQASTLRLPVVGGAKTDLLNLKESICSAMDVMQAMASSICQLSPKVGLVNSLVVEVANLSAKERALLEECKDLLSMMTAMQVRESSLRTHITQQKCLPRSQQ* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3098 639 PANTHER QWRF MOTIF-CONTAINING PROTEIN 9 12 638 - -
Lja5g3098 639 MobiDBLite consensus disorder prediction 358 372 - -
Lja5g3098 639 MobiDBLite consensus disorder prediction 1 15 - -
Lja5g3098 639 MobiDBLite consensus disorder prediction 385 415 - -
Lja5g3098 639 MobiDBLite consensus disorder prediction 251 305 - -
Lja5g3098 639 MobiDBLite consensus disorder prediction 153 170 - -
Lja5g3098 639 MobiDBLite consensus disorder prediction 280 302 - -
Lja5g3098 639 MobiDBLite consensus disorder prediction 1 129 - -
Lja5g3098 639 MobiDBLite consensus disorder prediction 78 103 - -
Lja5g3098 639 MobiDBLite consensus disorder prediction 153 200 - -
Lja5g3098 639 MobiDBLite consensus disorder prediction 326 415 - -
Lja5g3098 639 MobiDBLite consensus disorder prediction 50 71 - -
Lja5g3098 639 PANTHER AUGMIN FAMILY MEMBER 12 638 - -
Lja5g3098 639 MobiDBLite consensus disorder prediction 23 37 - -
Lja5g3098 639 Pfam QWRF family 287 605 IPR007573 -
Lja5g3098 639 MobiDBLite consensus disorder prediction 251 269 - -
Lja5g3098 639 Coils Coil 483 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3098 Lja-Chr5 60641280 60646714 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3098 5 60641280 60646714 Lja5g3098 5 60641280 60646714 ECH