Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3092 ATGACACCCAAAGGCAAAGGAGGACCTGTACCCTTCTCCGATATCGTCAAGCGAGAAAGAGACATTCTCAACAAAGATTACAACTCCGATCATAGTTTAACCATCTCTTCCTCCACCACCTCTGGTCTCAACTTGAGCTCAACGTTGGTGAAGAGTAGAGGACTCTCCTCCGGGGCTGTGGCTGCGGCGTTTAAGCACAACAACAAGACACTTCATTTCAAACTTGACACTGATTCAACTGTGCTGACCACATTTACTATAGCCAATGTTGTGCCTTCAACAAAAACCGTTGCTTCTATACGACTACCTTATTATGACTCCGGCAAGATTGCGGTTCAGTATCTTCATCATCATGTGGCTTTAACTGGTGCTGTTGGTTTGAACCGATCCCCTGATGTCGATTTTTCTGCGACTATTGGCACTCCCAGCATTGCTTTTGGAGCTGAAACCAGCTACTCCACAAGTGCTGGCAAGTTTACAAAGTACAATGCTGGCTTATGCTTCCAAATGCCAAGTTCCAATGCTTCAGTTATTCTAGCTGATAAGGGAGACTCTATGAAGGTGTCGTACTTGCGGGAGCTAGAAAGATTGAATGGGGGAGCTATTGTGGGAGAGATTAGCAGAGGATTCTCTAAAAATGACAACACGTTAACAGTTGGATGTTCATATGTGGTTGATTCTCAGACAGTTGTGAAGGCAAAGCTGAACAACCATGGCAATCTTGGGGCCTTGTTGCAGCATGAACTTACACACAAGTCATTCTTGACAATCTCTGGCGCCTTTGAAACAAAGGCTTTGGAAAAGAATCCCAAGTTTGGTTTCTCACTCTTGCTCAAGCCTTAA 843 0.4472 MTPKGKGGPVPFSDIVKRERDILNKDYNSDHSLTISSSTTSGLNLSSTLVKSRGLSSGAVAAAFKHNNKTLHFKLDTDSTVLTTFTIANVVPSTKTVASIRLPYYDSGKIAVQYLHHHVALTGAVGLNRSPDVDFSATIGTPSIAFGAETSYSTSAGKFTKYNAGLCFQMPSSNASVILADKGDSMKVSYLRELERLNGGAIVGEISRGFSKNDNTLTVGCSYVVDSQTVVKAKLNNHGNLGALLQHELTHKSFLTISGAFETKALEKNPKFGFSLLLKP* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3092 280 ProSitePatterns Eukaryotic mitochondrial porin signature. 223 245 IPR001925 GO:0005741|GO:0008308|GO:0098656
Lja5g3092 280 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 8 280 IPR001925 GO:0005741|GO:0008308|GO:0098656
Lja5g3092 280 PANTHER PORIN/VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL PROTEIN 8 280 - -
Lja5g3092 280 Pfam Eukaryotic porin 9 273 IPR027246 GO:0005741|GO:0055085
Lja5g3092 280 CDD Porin3_VDAC 9 279 IPR001925 GO:0005741|GO:0008308|GO:0098656
Lja5g3092 280 Gene3D Porin 4 279 IPR023614 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3092 Lja-Chr5 60557750 60559875 Dispersed/Transposed