Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3084 ATGGGAAAGCGTAACTCTCAACGTAAAAATGCTGCAATGTTGGATAGTGATGATGATATCAGTGTGAGTTCTTCACCAACTTCTCGAACCGGTCGCGTGTCGGTGTCTGGGACTCAAGAAGTGCACTTTGATCAAGATTATCTGCTTGACCAAGCTCTTGATGCTTTAGATGAGAAAAGGGGTTCTACGAGGGAGAAAGCTTTTTCATTGATCATTGGGGCTTTCAAGAGCAATATGCAGCATCAATTTGTTGACAAAAAATTTGCCACCTTATTACATCAGTGTCTTGCTTCAATAAAAAGAGGTTCCAAACAGGCATCTGCAAAGGAGGTAGCTTTGGCATCTCATGTCATCGGTTTGTTGGCCCTCACTGTTGAATGTGGTGATAATGCACGTGAAATATTTGAGGAATCAATTCGTCCTCTAGATGAATTTCTCACATCTAAATCAGATTCGATAAAGGTTCCATCATTGCTGGAGTGCTTGGCTATAATCACTTTTGTTGGTGGGAACAATCAAGAAGAAACAGAGAGATCGATGGACATAATGTGGCGAGTTATTCATCCCAAATTAGGTTCCAATGTAGTTACAGTCAAACCTTCAGCTCCATTAATAACGACTGTGGTATCTGCTTGGTCCTTTCTCCTCTCTACCATGAGCGAGTTGAAGTTAAATTCTAAAAATTGGCAAAATTCAATATCTTATTTATCTAGCCTTCTAGACAAGGAAGATCGGCCTGTACGTATTGCTGCTGGCAAAGCGCTAGCTCTAATATTTGAGATTGGAGTTATGGAGAAACTTTCTGCTAATTCTATAAGCGCAATGACTCGGGAAGAGAGTAAACCACAGGAAAGTTACATTCACTTACAAGGATTAAAAGGAAAGGTGATAACTCAAGTAAAAAACCTGTCTGTTGAGGCTGGTGGAAAAGGTTCTGCAAAGAAAGATCTTAATCATCAGAGGAGCGTGTTCCGAGATATCGTGGAGTTTTTTGAGTATGGTTACACTCCTGAAATTTCTATGAAGATTGGCGGTGATTCACTGCAAACATCTTCATGGTCCCAAGTGATACAGTTAAACTTTATCAGGCACTTTCTAGGGGGTGGTTTCATCAAGCATATGCAGGAAAACGAATTCCTTCATGATGTCTTTGGTTTCACACCAAGAAGAAGATATCTTAATAACAATGAACCTCGAATGTCTAGTGGTGAGAAGAGAATGTTCAAGTCTCCAAATTCGCCTCAGAGTAAGGCTAGGACCCAGTTTCTTAATAAGCAACGGCTGTTATCTGAGGGCAGAAACTTTGGTCACTATGCAGCCAATGTGGTTGATGATGCGTTTTGA 1344 0.4062 MGKRNSQRKNAAMLDSDDDISVSSSPTSRTGRVSVSGTQEVHFDQDYLLDQALDALDEKRGSTREKAFSLIIGAFKSNMQHQFVDKKFATLLHQCLASIKRGSKQASAKEVALASHVIGLLALTVECGDNAREIFEESIRPLDEFLTSKSDSIKVPSLLECLAIITFVGGNNQEETERSMDIMWRVIHPKLGSNVVTVKPSAPLITTVVSAWSFLLSTMSELKLNSKNWQNSISYLSSLLDKEDRPVRIAAGKALALIFEIGVMEKLSANSISAMTREESKPQESYIHLQGLKGKVITQVKNLSVEAGGKGSAKKDLNHQRSVFRDIVEFFEYGYTPEISMKIGGDSLQTSSWSQVIQLNFIRHFLGGGFIKHMQENEFLHDVFGFTPRRRYLNNNEPRMSSGEKRMFKSPNSPQSKARTQFLNKQRLLSEGRNFGHYAANVVDDAF* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3084 447 MobiDBLite consensus disorder prediction 17 36 - -
Lja5g3084 447 MobiDBLite consensus disorder prediction 1 36 - -
Lja5g3084 447 MobiDBLite consensus disorder prediction 397 416 - -
Lja5g3084 447 SUPERFAMILY ARM repeat 48 262 IPR016024 -
Lja5g3084 447 PANTHER INTERFERON-RELATED DEVELOPMENTAL REGULATOR 1 440 IPR039777 -
Lja5g3084 447 Pfam Interferon-related developmental regulator (IFRD) 21 332 IPR007701 -
Lja5g3084 447 Pfam Interferon-related protein conserved region 377 427 IPR006921 -
Lja5g3084 447 PANTHER INTERFERON-RELATED DEVELOPMENTAL REGULATOR 2-LIKE ISOFORM X1 1 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3084 Lja-Chr5 60493569 60500588 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3084 5 60493569 60500588 Lja1g4101 1 52034526 52038808 PCT