Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0942 ATGAAGAACATCAAGGGAATTAGCAATGCTATTTTTATCATGTTCATCCTCTCTCTGAGTGCAAGTTGTTATGGACAAGAAGACTTTGATGTTGATGCAGCTGCTCCAATGGAGAAAACAGAACAAGAGGCTCTGTACTCCACAATTCAAGGCTTTGTTGGCAATTCATGGAATGGCTCAGATCTTTATCCAGACCCTTGTGGTTGGACTCCTATTCAGGGTGTCTCTTGTGATCTGTTTGATGGATTTTGGTATGTTACTGTCTTGAACATTGGACCAATCGTTGACAATTCTCTGAGATGTACACAATATGTGGAATTTAGGCCACAGTTATTCAAGCTCAAGCACCTCAAAGTTCTATCCTTCTTCAATTGTTTTCAATCACAAACCAAGCTTCCAATTTCCATCCCCACTGGAAACTGGGAGAAACTATCAGGCAGCTTAGAATCACTGGAGTTCAGATCAAACCCAGGTCTCATTGGAAGAATTCCATCAAGTTTTGGGGTCCTCCAGAACCTCCAATCACTGGTGTTGCTAGAGAATGGGTTAACAGGTGAAATACCACCAAACATTGGCAATCTTACCAAGTTGAAGAGACTTGTTCTTTCTGGAAACTATCTTTCTGGGAGGATTCCTGATATTTTTGGAGGGTTAAAAGAGTTATTAATCCTTGATTTAAGTAGAAACTCATTGTCTGGACCTTTGCCTTTGACAATTGGAAGCTTAAGTTCAGTGTTGAAGCTTGATGTAGGCCACAACGTTCTGGAAGGGAATCTGCTAAATGAGTTTGCTAATCTTAAGAATCTGACCCTTATGGACCTTAGGAATAACAGATTCTCTGGGGGGTTGACATTGTCTTTGCAAGAGATGTGTTCCTTAGAAGAAATGGTTTTATCCAACAATCAAATTGGTGGTGACATCAGGATCCTAAAGTGGGAAAATCTTAAGAGCTTGGCCATTTTGGATCTCTCTAACATGGGGCTTGCAGGGGAAATTCCTGAGTCCTTATCAGAATTAAAGAGGTTGAGATTTTTGGGTCTTAGTGACAACAACCTCACAGGAAACCTGTCACCAAAGCTAGAAACTCTTCCTTGTCTTAATGCACTCTACCTAAGTGGAAACAATCTTTCAGGAGAGCTTAAATTCTCTAATGAGTTTTTTGGGAAAATGGGAAGACGTTTTGGTGCCTGGAACAACCCCAACCTTTGTTATCAACCAGATGGAGTAATGTCAACAAACCATGTTCCAAATGGGGTTAAGGCATGCCAGCATGGGGTGAATTTGCTAGAGTCTAACACAAAAACTAAGCTTTTCAATGGGAATATGGACCAAACTTCCCAATTCATAAGCTCTATGGGAATTTCTAGTTGTGCTACTAATGGCTTCTGGTGGATTTTTCTGGTAGAAATATTGATGATAGGTCTATTCCTAAACACTTAA 1440 0.4035 MKNIKGISNAIFIMFILSLSASCYGQEDFDVDAAAPMEKTEQEALYSTIQGFVGNSWNGSDLYPDPCGWTPIQGVSCDLFDGFWYVTVLNIGPIVDNSLRCTQYVEFRPQLFKLKHLKVLSFFNCFQSQTKLPISIPTGNWEKLSGSLESLEFRSNPGLIGRIPSSFGVLQNLQSLVLLENGLTGEIPPNIGNLTKLKRLVLSGNYLSGRIPDIFGGLKELLILDLSRNSLSGPLPLTIGSLSSVLKLDVGHNVLEGNLLNEFANLKNLTLMDLRNNRFSGGLTLSLQEMCSLEEMVLSNNQIGGDIRILKWENLKSLAILDLSNMGLAGEIPESLSELKRLRFLGLSDNNLTGNLSPKLETLPCLNALYLSGNNLSGELKFSNEFFGKMGRRFGAWNNPNLCYQPDGVMSTNHVPNGVKACQHGVNLLESNTKTKLFNGNMDQTSQFISSMGISSCATNGFWWIFLVEILMIGLFLNT* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0942 479 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Lja5g0942 479 Gene3D Ribonuclease Inhibitor 312 394 IPR032675 -
Lja5g0942 479 SUPERFAMILY L domain-like 46 380 - -
Lja5g0942 479 PANTHER RECEPTOR-LIKE PROTEIN 14 24 478 - -
Lja5g0942 479 Pfam Leucine rich repeat 196 255 IPR001611 GO:0005515
Lja5g0942 479 Gene3D Ribonuclease Inhibitor 212 311 IPR032675 -
Lja5g0942 479 Gene3D Ribonuclease Inhibitor 38 211 IPR032675 -
Lja5g0942 479 PANTHER PIRIFORMOSPORA INDICA-INSENSITIVE-LIKE PROTEIN 24 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0942 Lja-Chr5 9137496 9139525 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0942 147 422 Receptor kinase-like Gene Family AT4G08850 32.246 7.71e-24 103
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0942 5 9137496 9139525 Lja5g0942 5 9137496 9139525 ECH