Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0656 ATGAGTTCCATGGTTAATGTTAAGGCTTCAGAAAAGAGAGGCCCCAATGCAAGAAATGAATACAAACCAACAGACATGACCATTAAAGAGCTGGAGAGAAGGATATGGAAAAACCGCAAGCTGCTGAAGAATCTCAAGGAAGAGAGGGAACAAAAGGAGAGTAGCCATTCACTAAAGATTAACAAAAGGAGGAAGACCATGTCTCATGCACAAGATTGCCTCCACAGTCACATGATGAAGATGATGGTGGATTGTGATGCTATGGGATACGTCTACAGCATAATCCCTCATAAGGGGAAGCCAGTGAGTGATTCCTCTGACAATCTTCGTGGCTGGTGGAAGGAAAGGGCGACGTTTGATCCCGATGGCCCGGCAGCAATTGCAAATTTTGAGGAAGAAAGTGAACATGACCAGGGTGAAGACACAATATCATTTTACACTCTTCAGGAACTCCCTGACGCAACTTTAGGGACAATCTTGTCTAACCTGATGCAGCACTGTGAACCACCTCAGAGGAGGTACCCTCTGGACAAAGGTGTTCCCCCACCATGGTGGCCAACTGGGAAGGAACCATGGTGGCATGAGTTGGGGTTTCTCAAGGATCCTGGTTCTCCTCCTTACAAGAAACCTCATGATCTTAAGAAGACTTGGAAGGTGTGTGTGCTGACTGCTGTGGTCAAGCACATTTCCCCTGACATTGACAAAATTAGGAACATTGTCAGGTACTCTAGGACCCTCAAGGACAAGCTCACTGCTAAGGAAAATGCAATTTTGACGGCTGTCTTGAACCATGAGGAGTCACTGGCTAGAAATGCGCACCCTGAGGATGATGATGATGATGGAAGTAGCAGCTTTAGTGAGTTCATTTTGAATTATGAACATGACATTGGCATACAGAATATTGGTGATCATAGAGAGGTTGCTGTTGTGGCTGGAGATAGAAAGCAACCACCTCACTATGACAATGATGTGCCTCCAATGAATAAGAGAAAGCAACCATCTTCAAATGGTGCTAATAAGAGAAAACAGCAGGCTGATGATTCTGTTCAGGCAAATCATCCCCAGAATGAAGCTTACACCTATTATTACCCTAAATACCAATATGATGATCTTGGATTCAAACAAACTAACAGCAACAACAACAACCATGTCCAAATGGTTGAAGGGTCAAATTCTCAGCCTATTAGCAATGTCAATCCTGCTGCACCTCATGGTCAAACTACAGAACCTGTTGCAGATTGGACTCTTCCTGCTATCATTTATTTAGAGGAAGTGACTTCTAAACCTGTGGAATTCTACACTGCAGGCTTTCAGAACACAATGAATGCTGGGAGCATGCCACCTGTGGCTAATCAATACCTTCAGGTGCAAAATCTTCAGCCCTGA 1386 0.443 MSSMVNVKASEKRGPNARNEYKPTDMTIKELERRIWKNRKLLKNLKEEREQKESSHSLKINKRRKTMSHAQDCLHSHMMKMMVDCDAMGYVYSIIPHKGKPVSDSSDNLRGWWKERATFDPDGPAAIANFEEESEHDQGEDTISFYTLQELPDATLGTILSNLMQHCEPPQRRYPLDKGVPPPWWPTGKEPWWHELGFLKDPGSPPYKKPHDLKKTWKVCVLTAVVKHISPDIDKIRNIVRYSRTLKDKLTAKENAILTAVLNHEESLARNAHPEDDDDDGSSSFSEFILNYEHDIGIQNIGDHREVAVVAGDRKQPPHYDNDVPPMNKRKQPSSNGANKRKQQADDSVQANHPQNEAYTYYYPKYQYDDLGFKQTNSNNNNHVQMVEGSNSQPISNVNPAAPHGQTTEPVADWTLPAIIYLEEVTSKPVEFYTAGFQNTMNAGSMPPVANQYLQVQNLQP* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0656 461 MobiDBLite consensus disorder prediction 1 24 - -
Lja5g0656 461 Gene3D - 143 276 IPR023278 GO:0003700|GO:0005634
Lja5g0656 461 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 11 398 - -
Lja5g0656 461 SUPERFAMILY DNA-binding domain of EIN3-like 146 269 IPR023278 GO:0003700|GO:0005634
Lja5g0656 461 MobiDBLite consensus disorder prediction 314 354 - -
Lja5g0656 461 Coils Coil 28 48 - -
Lja5g0656 461 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 11 398 IPR006957 GO:0005634
Lja5g0656 461 Pfam Ethylene insensitive 3 30 266 IPR006957 GO:0005634
Lja5g0656 461 MobiDBLite consensus disorder prediction 328 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0656 Lja-Chr5 5901192 5902677 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0656 19 275 EIL Transcription Factor Family AT3G20770 54.682 1.08e-95 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Lja5g0656 EIN3 9.1e-94 No_clan